Commits for katrina

v252_base to v253_preview (2011-06-07 to 2011-06-14) v253

• staging update to metadat on beta, redmine #2881
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeOpenChromSynth.ra - lines changed 16, context: html, text, full: html, text
• adding log -10 equivalents to p-values that were missing it, redmine #2881
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromSynth.html - lines changed 10, context: html, text, full: html, text
• updating metadata: RipChip changed to RipTiliing
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeSunyAlbanyTiling.ra - lines changed 14, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeSunyAlbanyTiling.ra - lines changed 14, context: html, text, full: html, text
• releasing geo accessions, ucsc accessions, fileSortOrder, and metadata for fasta, fastq and csqual download files
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeGisDnaPet.ra - lines changed 588, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeGisDnaPet.ra - lines changed 588, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
• releasing file sort order
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGisDnaPet.ra - lines changed 1, context: html, text, full: html, text
• releasing updated metadata (extraneous entries removed, addition of ucscId) and addition of filesortorder
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeAffyRnaChip.ra - lines changed 1091, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeAffyRnaChip.ra - lines changed 1091, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAffyRnaChip.ra - lines changed 1, context: html, text, full: html, text
• releasing the revised RbpSupertrack html, redmine 460
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeRbpSuper.html - lines changed 28, context: html, text, full: html, text
• preparing metadata for Open Chrom Synth track release, redmine 2881
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeOpenChromSynth.ra - lines changed 146, context: html, text, full: html, text
• adding Open Chrom Synth, redmine 2881
  • src/hg/htdocs/ENCODE/downloads.html - lines changed 3, context: html, text, full: html, text
• releasing metadata updates for GIS RNA-seq (hg19), pushQ id 92
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeGisRnaSeq.ra - lines changed 92, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeGisRnaSeq.ra - lines changed 92, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.ra - lines changed 1, context: html, text, full: html, text
• releasing metadata update (CNV->Genotype & adding expIds), pqId 85
  • src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeHudsonalphaCnv.ra - lines changed 18, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeHudsonalphaCnv.ra - lines changed 18, context: html, text, full: html, text
• releasing metadata update (including adding expIds), pqId 86
  • src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeHudsonalphaMethyl27.ra - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeHudsonalphaMethyl27.ra - lines changed 24, context: html, text, full: html, text
• releasing metadata update (including adding expIds), pqId 87
  • src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeNhgriBip.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeNhgriNRE.ra - lines changed 14, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeNhgriBip.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeNhgriNRE.ra - lines changed 14, context: html, text, full: html, text
• releasing Release 2 of hg18 Duke Affy Exon track; dropped 4 subtracks (lhsr) and added experiment ids, redmine #2199
  • src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeDukeAffyExonArray.ra - lines changed 132, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeDukeAffyExonArray.ra - lines changed 132, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeDukeAffyExon.ra - lines changed 29, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeDukeAffyExonArray.html - lines changed 13, context: html, text, full: html, text