Commits for angie
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v254_preview2 to v254_base (2011-07-12 to 2011-07-19) v254
- MLQ #4480: Adding links to hg19 download files to the Neandertal portalpage, since Brooke noticed they were missing.
- src/hg/htdocs/Neandertal/index.html - lines changed 77, context: html, text, full: html, text
- MLQ #4606: user found that a two-base deletion was not recognized asa frameshift by pgSnp hgc handler. Fix: since dnaseq.c's translateSeq
returns a protein with empty sequence if the input is less than 3 bases
(like "-G"), check for emtpy sequence. I kind of wonder if translateSeq
should return "X" if the input is 1 or 2 bases...?
- Adding target for udcTest in lib/tests, but *not* hooking it up totop-level "make test". Also adding udcTrials.csh that runs udcTest
many times interspersed w/sleeps.
- src/lib/tests/udcTrials.csh - lines changed 15, context: html, text, full: html, text
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