File Changes for kate

v253_base to v254_preview (2011-06-28 to 2011-07-05) v254

• src/hg/encode/encodeReport/encodeReport.pl
  • lines changed 86, context: html, text, full: html, text
    Some preliminary exp ID fishing. This version in use Apr 13 - late June
  • lines changed 97, context: html, text, full: html, text
    Use experiment-defining variables from MDB and experiment table
  • lines changed 38, context: html, text, full: html, text
    Go to extreme lengths to locate release date
  • lines changed 3, context: html, text, full: html, text
    Preserve age and strain
  • lines changed 4, context: html, text, full: html, text
    Exclude objects in composites w/o expVars. Including them added spurious Caltech submissions from the ENCODE Reg track
• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 4, context: html, text, full: html, text
    Add links (just dummy for now) to preview browser in trackUI
  • lines changed 3, context: html, text, full: html, text
    Activate preview browser links on track UI
  • lines changed 5, context: html, text, full: html, text
    Changes after review by Katrina -- remove ENCODE top link on trackUi, instead link to image, etc.
  • lines changed 1, context: html, text, full: html, text
    Cosmetics on ENCODE track UI
• src/hg/htdocs/ENCODE/contacts.html
  • lines changed 3, context: html, text, full: html, text
    Add Matt
• src/hg/htdocs/ENCODE/dataPlansMouse.html
  • lines changed 1, context: html, text, full: html, text
    Fix to use correct blue bar (not the special one for the Data Policy page)
• src/hg/htdocs/ENCODE/dataStandards.html
  • lines changed 14, context: html, text, full: html, text
    Add RNA-seq doc to standards page
  • lines changed 1, context: html, text, full: html, text
    Fix xxx### broken link
• src/hg/htdocs/ENCODE/dataSummary.html
  • lines changed 1, context: html, text, full: html, text
    Fix to use correct blue bar (not the special one for the Data Policy page)
• src/hg/htdocs/ENCODE/dataSummaryMouse.html
  • lines changed 1, context: html, text, full: html, text
    Fix to use correct blue bar (not the special one for the Data Policy page)
• src/hg/htdocs/ENCODE/downloads.html
  • lines changed 2, context: html, text, full: html, text
    Fix to use correct blue bar (not the special one for the Data Policy page)
• src/hg/htdocs/ENCODE/downloadsMouse.html
  • lines changed 8, context: html, text, full: html, text
    Fix to use correct blue bar (not the special one for the Data Policy page)
• src/hg/htdocs/ENCODE/index.html
  • lines changed 1, context: html, text, full: html, text
    Changes after review by Katrina -- remove ENCODE top link on trackUi, instead link to image, etc.
• src/hg/htdocs/ENCODE/search.html
  • lines changed 1, context: html, text, full: html, text
    Fix to use correct blue bar (not the special one for the Data Policy page)
• src/hg/htdocs/inc/encode.topbar.html
  • lines changed 4, context: html, text, full: html, text
    Add Preview browser link to top blue bar for ENCODE static pages
• src/hg/lib/hui.c
  • lines changed 5, context: html, text, full: html, text
    Add links (just dummy for now) to preview browser in trackUI
  • lines changed 4, context: html, text, full: html, text
    Activate preview browser links on track UI
  • lines changed 9, context: html, text, full: html, text
    Changes after review by Katrina -- remove ENCODE top link on trackUi, instead link to image, etc.
  • lines changed 3, context: html, text, full: html, text
    Cosmetics on ENCODE track UI