File Changes for wong

v256_preview2 to v256_base (2011-08-23 to 2011-08-29) v256

• src/hg/encode/encodeMkFilesList/encodeMkFilesList
  • lines changed 9, context: html, text, full: html, text
    changed come numeric processing behavior, fixed a typo
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeSunyAlbanyGeneSt.release2.notes
  • lines changed 20, context: html, text, full: html, text
    updated notes file
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
  • lines changed 4, context: html, text, full: html, text
    put in treatment for haib, dmso 0.02pct 7d
  • lines changed 1, context: html, text, full: html, text
    corrected regex pattern so it complies with POSIX regex patterns. (We should consider moving our regex engine to PCRE, so it makes things consistent.
  • lines changed 1, context: html, text, full: html, text
    WERI-Rb-1 is female, not male
• src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeYaleChIPseq.ra
  • lines changed 10, context: html, text, full: html, text
    changed HepG2b > HepG2
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra
  • lines changed 29, context: html, text, full: html, text
    changed e2f6scWhataver to E2F6 in Haib Tfbs. Also added line for .new in trackDb
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSunyAlbanyGeneSt.ra
  • lines changed 526, context: html, text, full: html, text
    restored V1 metadata
  • lines changed 141, context: html, text, full: html, text
    renamed some v2 files so they are consistent with v1 filenames
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 2, context: html, text, full: html, text
    changed e2f6scWhataver to E2F6 in Haib Tfbs. Also added line for .new in trackDb
  • lines changed 2, context: html, text, full: html, text
    modified for trackDb also
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.new.ra
  • lines changed 0, context: html, text, full: html, text
    took out errant tab
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.new.ra
  • lines changed 13, context: html, text, full: html, text
    changed e2f6scWhataver to E2F6 in Haib Tfbs. Also added line for .new in trackDb
  • lines changed 35, context: html, text, full: html, text
    subgroup error fexed
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyGeneSt.new.html
  • lines changed 171, context: html, text, full: html, text
    made html for suny gene st release2 modified trackDb
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyGeneSt.new.ra
  • lines changed 1, context: html, text, full: html, text
    made html for suny gene st release2 modified trackDb
  • lines changed 12, context: html, text, full: html, text
    renamed some v2 files so they are consistent with v1 filenames
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhRnaSeq.html
  • lines changed 4, context: html, text, full: html, text
    fixed stuff per QA request
  • lines changed 1, context: html, text, full: html, text
    changed email address to be gersein lab
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhRnaSeq.ra
  • lines changed 13, context: html, text, full: html, text
    fixed stuff per QA request
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhTfbs.new.ra
  • lines changed 860, context: html, text, full: html, text
    remade the .new.ra for sydh tfbs
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.html
  • lines changed 14, context: html, text, full: html, text
    qa changes to unc protgeno
  • lines changed 16, context: html, text, full: html, text
    Merge branch 'master' into validate
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.ra
  • lines changed 1, context: html, text, full: html, text
    qa changes to unc protgeno
  • lines changed 2, context: html, text, full: html, text
    Merge branch 'master' into validate
  • lines changed 1, context: html, text, full: html, text
    added controlledVocabulary line