Commits for wong
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v256_preview to v256_preview2 (2011-08-16 to 2011-08-23) v256
- loaded last 4 submission for unc bsu prot
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUncBsuProt.ra - lines changed 75, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.ra - lines changed 21, context: html, text, full: html, text
- added in missing expId's and accessions for uw and sydh tfbs
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 37, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 149, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwTfbs.ra - lines changed 329, context: html, text, full: html, text
- added in md5sums for new files
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUncBsuProt.ra - lines changed 5, context: html, text, full: html, text
- added md5sums
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGencodeV3.ra - lines changed 4, context: html, text, full: html, text
- moved release2 stuff into release 1
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.ra - lines changed 19, context: html, text, full: html, text
- started release2 for unc bsu prot
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.new.ra - lines changed 99, context: html, text, full: html, text
- changed error message
- src/hg/encode/encodeMkFilesList/encodeMkFilesList - lines changed 1, context: html, text, full: html, text
- added dcc accession and expId
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGencodeV3.ra - lines changed 7, context: html, text, full: html, text
- error in typing t>d
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- changed tags for pbdefetal from PBDEF to PBDEFETAL
- src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 1, context: html, text, full: html, text
- added expids and dcc accessions
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaPet.ra - lines changed 25, context: html, text, full: html, text
- changed date unrestricted and date submitted for items in hg18 and hg19
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaPet.ra - lines changed 247, context: html, text, full: html, text
- last time I changed date unrestricteds, i didnt change alpha again after the revert. so I'm doing it now, so when release 2 comes along, we don't have weirdo metadata inconsistencies
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 74, context: html, text, full: html, text
- added in first version of qaDateUnrestrictedCheck, no comments, basic usage statement, and functionality only. Referenced in redmine #4331
- src/hg/encode/qaDateUnrestrictedCheck/makefile - lines changed 27, context: html, text, full: html, text
- src/hg/encode/qaDateUnrestrictedCheck/qaDateUnrestrictedCheck - lines changed 100, context: html, text, full: html, text
- added ftp link to gencove v3
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV3.html - lines changed 4, context: html, text, full: html, text
- forgot to change the actual values in metaDb
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 19, context: html, text, full: html, text
- changed how mkfiles generates list of files in directory by processing ls
- src/hg/encode/encodeMkFilesList/encodeMkFilesList - lines changed 5, context: html, text, full: html, text
- decided to lock the shared variable just in case
- src/hg/encode/encodeMkFilesList/encodeMkFilesList - lines changed 5, context: html, text, full: html, text
- fixed some control errros ans revoked md5sum colliding files
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 32, context: html, text, full: html, text
- reversed release 2 changes
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- removed lines for mistakenly added entries from metaDb
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUncBsuProt.ra - lines changed 78, context: html, text, full: html, text
- made the K562b to K62 transition
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeYaleChIPseq.ra - lines changed 127, context: html, text, full: html, text
- revoked an experiment's views for which both alignment replicates were bad
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 3, context: html, text, full: html, text
- converted the whole shebang to V2
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSunyAlbanyGeneSt.ra - lines changed 169, context: html, text, full: html, text
- changes for suny genest in trackDb for V2ness
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyGeneSt.new.ra - lines changed 278, context: html, text, full: html, text
- fixed spelling error
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- revoked colliding files
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeChromatinMap.ra - lines changed 9, context: html, text, full: html, text
- revoked all objects for colliding experiments
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 25, context: html, text, full: html, text
- updated notes for sydh tfbs release 1and added notes for gene ST release 2
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeSunyAlbanyGeneSt.release2.notes - lines changed 154, context: html, text, full: html, text
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeSydhTfbs.release1.notes - lines changed 1210, context: html, text, full: html, text
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