File Changes for kate

v257_preview to v257_preview2 (2011-09-06 to 2011-09-13) v257

• src/hg/encode/encodeExp/listAccessionsHg19.sh
  • lines changed 2, context: html, text, full: html, text
    Trivial script for AWG -- list DCC accessions for all hg19 download files
  • lines changed 1, context: html, text, full: html, text
    Prune composites
• src/hg/hgApi/hgApi.c
  • lines changed 147, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/chipMatrix.css
  • lines changed 11, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/dataMatrix.css
  • lines changed 104, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeChipMatrixHuman.html
  • lines changed 14, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeChipMatrixInclude.html
  • lines changed 26, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeChipMatrixMouse.html
  • lines changed 13, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeDataMatrixHuman.html
  • lines changed 14, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeDataMatrixInclude.html
  • lines changed 25, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeDataMatrixMouse.html
  • lines changed 13, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeDataSummaryHuman.html
  • lines changed 14, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeDataSummaryInclude.html
  • lines changed 49, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/ENCODE/dataMatrix/encodeDataSummaryMouse.html
  • lines changed 13, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/inc/encodeProject.topbar.html
  • lines changed 0, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/htdocs/style/encodeProject.css
  • lines changed 104, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/encodeChipMatrix.js
  • lines changed 175, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
  • lines changed 1, context: html, text, full: html, text
    Remove dev browser refs
• src/hg/js/encodeDataMatrix.js
  • lines changed 176, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
  • lines changed 1, context: html, text, full: html, text
    Remove dev browser refs
• src/hg/js/encodeDataSummary.js
  • lines changed 171, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
  • lines changed 1, context: html, text, full: html, text
    Remove dev browser refs
• src/hg/js/encodeProject.js
  • lines changed 214, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
  • lines changed 1, context: html, text, full: html, text
    Fix sorting problem on cell tiers
• src/hg/js/makefile
  • lines changed 3, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/test/JsTestDriver-1.3.2.jar
  • lines changed 0, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/test/README
  • lines changed 130, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/test/coverage-1.3.2.jar
  • lines changed 0, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/test/jsTestCov
  • lines changed 3, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/test/jsTestDriver.conf
  • lines changed 12, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/test/jsTestRun
  • lines changed 3, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/test/jsTestServer
  • lines changed 3, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).
• src/hg/js/test/testEncodeProject.js
  • lines changed 49, context: html, text, full: html, text
    ENCODE data matrix web app. First cut with most functionality in place, for internal feature review. There are 3 web pages -- a Data Summary, Data Matrix, and Chip Matrix -- for both human and mouse. This version doesn't have proper Mouse support. The Chip Matrix is missing some features present in the Data Matrix. There are performance improvements needed (notably, additional features in hgApi to limit data transferred by organism or other filters).