Commits for vsmalladi

v257_preview to v257_preview2 (2011-09-06 to 2011-09-13) v257

• Updated the md5sum in the metaData with the md5sum's of the files found in the downloads directory. Some of the md5sum's given by the lab were incorrect because we gz some of the files which changes the md5sum. Also since the fastq's are tar'd there is only 1 md5sum rather than mutliple individual md5sum's.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCaltechTfbs.ra - lines changed 86, context: html, text, full: html, text
• Updated the md5sum in the metaData with the md5sum's of the files found in the downloads directory. Some of the md5sum's given by the lab were incorrect because we gz some of the files which changes the md5sum. Also since the fastq's are tar'd there is only 1 md5sum rather than mutliple individual md5sum's.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCaltechHist.ra - lines changed 37, context: html, text, full: html, text
• Removed spaces in references for journal with name USA. Also added period after journal for 5 reference. Removed period in abbreviation for Journal Nat. Methods. Redmine #2726.
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.new.html - lines changed 2, context: html, text, full: html, text
• Uncommenting out CD20+ since there are experiments that use. Redmine #5024.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 17, context: html, text, full: html, text
• Updated configuration of window function for Raw Signal to be mean+whiskers. Also updated References to follow standards (alphabetical etc). Redmine #236. Note #36.
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeUwDnaseSeq.new.html - lines changed 13, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeUwDnaseSeq.new.ra - lines changed 1, context: html, text, full: html, text
• Replaced submission 3044 with 4817.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodePsuTfbs.ra - lines changed 113, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodePsuTfbs.ra - lines changed 36, context: html, text, full: html, text