Commits for steve
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v264_preview to v264_preview2 (2012-02-21 to 2012-02-28) v264
- Staging HAIB RNA-seq on beta (redmine #1710)
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeHaibRnaSeq.ra - lines changed 4723, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- Matt updated the metadata with the new ENCODE Data Freeze date
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeHaibRnaSeq.ra - lines changed 78, context: html, text, full: html, text
- Made changes suggested in Katrina's code review (redmine #7075)
- src/hg/htdocs/ENCODE/experiment_guidelines.html - lines changed 1, context: html, text, full: html, text
- src/hg/htdocs/ENCODE/platform_characterization.html - lines changed 1, context: html, text, full: html, text
- Applied Matt's md5sum metadata changes (redmine #7019)
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeOpenChromSynth.ra - lines changed 18, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeUwDgf.ra - lines changed 98, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeOpenChromSynth.ra - lines changed 18, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeUwDgf.ra - lines changed 98, context: html, text, full: html, text
- Metadata on alpha was changed after making beta previously. Copying from alpha to beta and from beta to public. Staging track on RR. (redmine #1634)
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeCshlShortRnaSeq.ra - lines changed 245, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeCshlShortRnaSeq.ra - lines changed 9178, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- Staging HAIB RNA-seq (Release 1) on RR (redmine #1710)
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeHaibRnaSeq.ra - lines changed 4723, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- Added link for HAIB RNA-seq (redmine #1710)
- src/hg/htdocs/ENCODE/downloads.html - lines changed 5, context: html, text, full: html, text
- Staging Broad Histone (Release 2) on beta (redmine #4145)
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeBroadHistone.ra - lines changed 14306, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- Venkat made some changes to the metadata (redmine #4145)
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeBroadHistone.ra - lines changed 458, context: html, text, full: html, text
- Venkat made changes to the metadata (redmine #4145)
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeBroadHistone.ra - lines changed 459, context: html, text, full: html, text
- Staging CSHL Long RNA-Seq on beta (redmine #5986)
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeCshlLongRnaSeq.ra - lines changed 7265, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- Applied Matt's patch (redmine #7115)
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeMapability.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeMapability.patch.html - lines changed 146, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeMapability.patch.ra - lines changed 137, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeMapability.ra - lines changed 1, context: html, text, full: html, text
- Applied Matt's patch (redmine #7115)
- src/hg/makeDb/trackDb/human/hg19/wgEncodeMapability.ra - lines changed 1, context: html, text, full: html, text
- Converted hard links to relative links. Also edited previous changes to hg18 because they didn't require any special javascripting. (redmine #6526)
- src/hg/makeDb/trackDb/human/hg18/wgEncodeCshlLongRnaSeq.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeDNAseSuper.html - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeDnaMethylSuper.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeDukeAffyExonArray.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeExonArraySuper.html - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeHistoneSuper.html - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeHudsonalphaCnv.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeHudsonalphaMethyl27.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeRnaSeqSuper.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeRnaSubcellLocSuper.html - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeTfBindingSuper.html - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSc.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.html - lines changed 5, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeChromSuper.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeDNAseSuper.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeDnaMethylSuper.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibGenotype.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethyl450.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibShRnaSeq.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.release2.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHistoneSuper.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.release2.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeProtGenoSuper.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRbpSuper.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRnaSeqSuper.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRnaSubcellLocSuper.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeSunySwitchgear.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeTfBindingSuper.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.html - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release3.html - lines changed 1, context: html, text, full: html, text
- Applied Matt's patch to include spacing between units in long labels (redmine #1710)
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibRnaSeq.patch.ra - lines changed 870, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibRnaSeq.ra - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
- Updated metadata with new freeze dates. New sex for items in wgEncodeHaibMethyl450.ra and wgEncodeHaibMethylRrbs.ra. New geoSampleAccessions in wgEncodeSunyAlbanyGeneSt.ra. (redmine #6581)
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeBroadHmm.ra - lines changed 19, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeHaibMethyl450.ra - lines changed 65, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeHaibMethylRrbs.ra - lines changed 240, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeSunyAlbanyGeneSt.ra - lines changed 121, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeSydhNsome.ra - lines changed 43, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeBroadHmm.ra - lines changed 19, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeCaltechRnaSeq.ra - lines changed 309, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeHaibMethyl450.ra - lines changed 65, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeHaibMethylRrbs.ra - lines changed 240, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeMapability.ra - lines changed 5, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeSunyAlbanyGeneSt.ra - lines changed 121, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeSydhNsome.ra - lines changed 43, context: html, text, full: html, text
- Staging UW CTCF Binding (Release 3) on beta (redmine #6323)
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeUwTfbs.ra - lines changed 67, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
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