File Changes for hiram

v264_base to v265_preview (2012-03-06 to 2012-03-13) v265

• src/hg/htdocs/indexIntro.html
  • lines changed 1, context: html, text, full: html, text
    redmine issue 7108
• src/hg/lib/grcIncidentDb.as
  • lines changed 9, context: html, text, full: html, text
    change description comment due to new printout of extra bigBed fields change
• src/hg/lib/ncbiIncidentDb.as
  • lines changed 1, context: html, text, full: html, text
    change description comment due to new printout of extra bigBed fields change
• src/hg/makeDb/doc/hg19.txt
  • lines changed 55, context: html, text, full: html, text
    running mm10 lastz and removed some spaces at the ends of lines
  • lines changed 10, context: html, text, full: html, text
    swap mm10 lastz done
  • lines changed 1, context: html, text, full: html, text
    running lastz for panTro3 ponAbe2
• src/hg/makeDb/doc/mm10.txt
  • lines changed 21, context: html, text, full: html, text
    swap mm10 to hg19 lastz done
  • lines changed 279, context: html, text, full: html, text
    running lastz for rn4 gorGor3 nomLeu1 and rheMac3
  • lines changed 139, context: html, text, full: html, text
    completed several lastz runs on mm10
  • lines changed 223, context: html, text, full: html, text
    running papHam1 saiBol1 calJac3 panTro4 tarSyr1 lastz
  • lines changed 7, context: html, text, full: html, text
    lastz runs to mm10 coming to completion
• src/hg/makeDb/doc/otoGar3.txt
  • lines changed 371, context: html, text, full: html, text
    initial browser built and masking started
• src/hg/makeDb/doc/panTro3.txt
  • lines changed 49, context: html, text, full: html, text
    running lastz for panTro3 ponAbe2
  • lines changed 8, context: html, text, full: html, text
    lastz runs to mm10 coming to completion
• src/hg/makeDb/doc/panTro4.txt
  • lines changed 66, context: html, text, full: html, text
    construct UCSC to Ensembl name translation and load v65 Ensembl genes
• src/hg/makeDb/doc/papHam1.txt
  • lines changed 22, context: html, text, full: html, text
    lastz runs to mm10 coming to completion
• src/hg/makeDb/doc/ponAbe2.txt
  • lines changed 49, context: html, text, full: html, text
    running lastz for panTro3 ponAbe2
  • lines changed 14, context: html, text, full: html, text
    completed several lastz runs on mm10
• src/hg/makeDb/trackDb/bushbaby/otoGar3/description.html
  • lines changed 132, context: html, text, full: html, text
    initial files from makeGenomeDb.pl
• src/hg/makeDb/trackDb/bushbaby/otoGar3/gap.html
  • lines changed 64, context: html, text, full: html, text
    initial files from makeGenomeDb.pl
• src/hg/makeDb/trackDb/bushbaby/otoGar3/gold.html
  • lines changed 23, context: html, text, full: html, text
    initial files from makeGenomeDb.pl
• src/hg/makeDb/trackDb/bushbaby/otoGar3/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    initial files from makeGenomeDb.pl
• src/hg/makeDb/trackDb/makefile
  • lines changed 1, context: html, text, full: html, text
    adding otoGar3 to the build
• src/hg/makeDb/trackDb/mouse/mm10/trackDb.chainNet.ra
  • lines changed 226, context: html, text, full: html, text
    grouping primate chain net tracks into one control
• src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra
  • lines changed 3, context: html, text, full: html, text
    grouping primate chain net tracks into one control
• src/hg/utils/automation/grcIncidentDb.pl
  • lines changed 303, context: html, text, full: html, text
    updated to new XML schema from NCBI
• src/hg/utils/automation/ncbiIncidentDb.pl
  • lines changed 174, context: html, text, full: html, text
    updated to new NCBI XML schema