File Changes for braney

v265_base to v266_preview (2012-03-27 to 2012-04-10) v266

• src/TAGS
  • lines changed 18929, context: html, text, full: html, text
    more work on annoGratorGpVar and gpFx libraries.
• src/hg/hgTracks/bedTrack.c
  • lines changed 7, context: html, text, full: html, text
    fix #7505 by adding a track handler for the pesky broken track
• src/hg/hgTracks/hgTracks.h
  • lines changed 3, context: html, text, full: html, text
    fix #7505 by adding a track handler for the pesky broken track
• src/hg/hgTracks/simpleTracks.c
  • lines changed 1, context: html, text, full: html, text
    fix #7505 by adding a track handler for the pesky broken track
• src/hg/inc/annoGratorGpVar.h
  • lines changed 23, context: html, text, full: html, text
    start on genepred / variant annoGrator. #6152
  • lines changed 12, context: html, text, full: html, text
    more work on annoGratorGpVar and gpFx libraries.
• src/hg/inc/gpFx.h
  • lines changed 28, context: html, text, full: html, text
    more work on annoGratorGpVar and gpFx libraries.
• src/hg/lib/annoGratorGpVar.c
  • lines changed 133, context: html, text, full: html, text
    start on genepred / variant annoGrator. #6152
  • lines changed 54, context: html, text, full: html, text
    more work on annoGratorGpVar and gpFx libraries.
• src/hg/lib/gpFx.c
  • lines changed 96, context: html, text, full: html, text
    more work on annoGratorGpVar and gpFx libraries.
• src/hg/lib/makefile
  • lines changed 1, context: html, text, full: html, text
    start on genepred / variant annoGrator. #6152
  • lines changed 1, context: html, text, full: html, text
    more work on annoGratorGpVar and gpFx libraries.
• src/hg/lib/tests/annoGratorTester.c
  • lines changed 18, context: html, text, full: html, text
    start on genepred / variant annoGrator. #6152
  • lines changed 1, context: html, text, full: html, text
    more work on annoGratorGpVar and gpFx libraries.
• src/hg/lib/tests/annoGratorTests.mk
  • lines changed 5, context: html, text, full: html, text
    start on genepred / variant annoGrator. #6152
• src/hg/lib/tests/expected/annoGrator/pgSnpKgDbToGpFx.txt
  • lines changed 4, context: html, text, full: html, text
    start on genepred / variant annoGrator. #6152
  • lines changed 5, context: html, text, full: html, text
    more work on annoGratorGpVar and gpFx libraries.
• src/hg/makeDb/doc/uniProt/sp120323.txt
  • lines changed 54, context: html, text, full: html, text
    build new uniProt database (#7045)
• src/hg/makeDb/genbank/etc/genbank.conf
  • lines changed 16, context: html, text, full: html, text
    add strPur4 for Kord.
• src/hg/utils/omim/validateOmim.sh
  • lines changed 8, context: html, text, full: html, text
    don't check "numbering" field in omimGeneMap because it changes arbitrarily #6943
• src/lib/annoGrator.c
  • lines changed 2, context: html, text, full: html, text
    start on genepred / variant annoGrator. #6152
  • lines changed 2, context: html, text, full: html, text
    fix bug in annoGratorClose
• src/lib/pipeline.c
  • lines changed 227, context: html, text, full: html, text
    checking Mark's changes back in. #1201
• src/lib/tests/expected/pipelineExecError.err
  • lines changed 2, context: html, text, full: html, text
    checking Mark's changes back in. #1201
• src/lib/tests/expected/pipelineExecError.parent.err
  • lines changed 2, context: html, text, full: html, text
    checking Mark's changes back in. #1201
• src/lib/tests/makefile
  • lines changed 9, context: html, text, full: html, text
    checking Mark's changes back in. #1201