File Changes for fang

v266_preview to v266_preview2 (2012-04-10 to 2012-04-17) v266

• src/hg/encode/DAFs/3.0/hg19/wgEncodeUncBsuProt2.daf
  • lines changed 68, context: html, text, full: html, text
    new daf file with new compositePrefix
  • lines changed 68, context: html, text, full: html, text
    this is replaced back by xxxProtGenc.daf as C & V are concerned that 2 may confuse people
• src/hg/encode/DAFs/3.0/hg19/wgEncodeUncBsuProtGenc.daf
  • lines changed 68, context: html, text, full: html, text
    for the new track for new datasets with hg19/gencode search and both unmodified and modified peptide mapping, this sharet the same supertrack with the old release
  • lines changed 68, context: html, text, full: html, text
    remove this file, it is replaced by xxxProt2.daf at the lab's request
  • lines changed 68, context: html, text, full: html, text
    changed the name back as C & V are concerned that 2 in xxxProt2 may confuse people
• src/hg/encode/DAFs/3.0/mm9/wgEncodeCaltechRnaSeq.daf
  • lines changed 6, context: html, text, full: html, text
    add Signal view for unique reads only bigwig file, named as xxx.unique.bigwig and use RawSignal view for the regular bigwig file containing both multi- and uniq-reads
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile
  • lines changed 1, context: html, text, full: html, text
    add xxxUncBsuProtGenc track
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUncBsuProtGenc.ra
  • lines changed 5, context: html, text, full: html, text
    creating basic trackDb and metaDb for xxxUncBsuProtGenc tracks
  • lines changed 297, context: html, text, full: html, text
    update with new submissions
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 3, context: html, text, full: html, text
    add xxxUncBsuProtGenc track
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProtGenc.release1.ra
  • lines changed 57, context: html, text, full: html, text
    creating basic trackDb and metaDb for xxxUncBsuProtGenc tracks
  • lines changed 13, context: html, text, full: html, text
    fix typos in view name, remove view for hg19 search only results
  • lines changed 1, context: html, text, full: html, text
    fix typo
  • lines changed 54, context: html, text, full: html, text
    update with new submissions
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra
  • lines changed 3, context: html, text, full: html, text
    remove merge conflict line
• src/hg/makeDb/trackDb/mouse/mm9/trackDb.wgEncode.ra
  • lines changed 1, context: html, text, full: html, text
    include xxxSydhHist.release2.ra
  • lines changed 1, context: html, text, full: html, text
    add beta,product to the previous release
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechRnaSeq.release1.html
  • lines changed 1, context: html, text, full: html, text
    modified release note
  • lines changed 28, context: html, text, full: html, text
    reformat references
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechRnaSeq.release1.ra
  • lines changed 1, context: html, text, full: html, text
    remove .html from the html file in the top stanza
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.html
  • lines changed 2, context: html, text, full: html, text
    fix the html p tag
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhHist.release2.ra
  • lines changed 0, context: html, text, full: html, text
    clean up indent
  • lines changed 27, context: html, text, full: html, text
    clean up short labels