Commits for tdreszer
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v266_preview to v266_preview2 (2012-04-10 to 2012-04-17) v266
- Galt pointed out a better way of bracketing the git command used to determine the cycle's check-ins.
- src/utils/qa/weeklybld/doNewBranch.csh - lines changed 2, context: html, text, full: html, text
- src/utils/qa/weeklybld/summaryEmail.sh - lines changed 2, context: html, text, full: html, text
- Added -lm to a bunch of makefiles since Galt's recent change (I think) calls math routines in lib code.
- src/cdnaAli/ali2alx/makefile - lines changed 1, context: html, text, full: html, text
- src/cdnaAli/binGood/makefile - lines changed 1, context: html, text, full: html, text
- src/cdnaAli/cdnaOff/makefile - lines changed 1, context: html, text, full: html, text
- src/cdnaAli/cluster/makefile - lines changed 1, context: html, text, full: html, text
- src/cdnaAli/findCdna/makefile - lines changed 1, context: html, text, full: html, text
- src/cdnaAli/g2cCheck/makefile - lines changed 1, context: html, text, full: html, text
- src/cdnaAli/introns/makefile - lines changed 1, context: html, text, full: html, text
- src/cdnaAli/sortFilt/makefile - lines changed 1, context: html, text, full: html, text
- src/cdnaAli/stitchea/makefile - lines changed 1, context: html, text, full: html, text
- src/index/indexfa/makefile - lines changed 1, context: html, text, full: html, text
- src/index/indexgl/makefile - lines changed 1, context: html, text, full: html, text
- src/index/ixali/makefile - lines changed 1, context: html, text, full: html, text
- src/index/ixword1/makefile - lines changed 1, context: html, text, full: html, text
- src/index/ixword3/makefile - lines changed 1, context: html, text, full: html, text
- src/index/makepgo/makefile - lines changed 1, context: html, text, full: html, text
- src/index/stToXao/makefile - lines changed 1, context: html, text, full: html, text
- src/lib/tests/makefile - lines changed 15, context: html, text, full: html, text
- src/reformat/fatont4/makefile - lines changed 1, context: html, text, full: html, text
- src/reformat/gb2cdi/makefile - lines changed 1, context: html, text, full: html, text
- src/reformat/gbtofa/makefile - lines changed 1, context: html, text, full: html, text
- src/reformat/geniegff/makefile - lines changed 1, context: html, text, full: html, text
- src/reformat/gffgenes/makefile - lines changed 1, context: html, text, full: html, text
- src/reformat/moresyn/makefile - lines changed 1, context: html, text, full: html, text
- src/scanIntrons/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/addCols/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/aveCols/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/catUncomment/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/ccCp/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/chopFaLines/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/countChars/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/faNoise/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/faOneRecord/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/faSplit/makefile - lines changed 1, context: html, text, full: html, text
- src/weblet/counter/makefile - lines changed 1, context: html, text, full: html, text
- src/weblet/hitreport/makefile - lines changed 1, context: html, text, full: html, text
- src/xenoAli/bwana/makefile - lines changed 1, context: html, text, full: html, text
- Another batch of makefile changes to add -lm
- src/hg/autoXml/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/ctgToChromFa/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/fakeOut/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/gbGetEntries/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/gbOneAcc/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/patCount/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/splitFa/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/fixCr/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/htmlPics/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/jkUniq/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/newProg/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/nibFrag/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/nibSize/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/rmFaDups/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/scaffoldFaToAgp/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/scrambleFa/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/subChar/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/toLower/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/toUpper/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/undupFa/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/upper/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/wordLine/makefile - lines changed 1, context: html, text, full: html, text
- Changed name of global var to avoid conflict with Galt's lib changes.
- src/utils/findMotif/findMotif.c - lines changed 4, context: html, text, full: html, text
- Changed name of function to avoid conflicting with lib function
- src/hg/geneBounds/orf/orf.c - lines changed 16, context: html, text, full: html, text
- Changed name of local function to not conflict with global function. These cases were fallout from Galt's check-in, I believe. I am fixing these as per my duties as buildMeister
- src/hg/mouseStuff/netStats/netStats.c - lines changed 4, context: html, text, full: html, text
- v266 preview2
- src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text
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