File Changes for wong

v268_preview to v268_preview2 (2012-05-22 to 2012-05-29) v268

• python/lib/ucscGb/encode/track.py
  • lines changed 13, context: html, text, full: html, text
    changing the way current trackDb is determined more robust, and doesn't fail when there's no alpha
• src/hg/encode/encodeQaPrepareRelease/encodeQaPrepareRelease
  • lines changed 3, context: html, text, full: html, text
    fixing header
• src/hg/encode/qaAddTrackReferences/qaAddTrackReferences
  • lines changed 17, context: html, text, full: html, text
    added in functionality to get the link to the original journal (or as close as ncbi does)
• src/hg/encode/qaUpdateMetadata/qaUpdateMetadata
  • lines changed 2, context: html, text, full: html, text
    minor maintenence
• src/hg/encode/raMerge/raMerge
  • lines changed 3, context: html, text, full: html, text
    minor maintenence
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlLongRnaSeq.release2.notes
  • lines changed 523, context: html, text, full: html, text
    updating notes for cshl long
  • lines changed 21, context: html, text, full: html, text
    fixes to prep for qa
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
  • lines changed 6, context: html, text, full: html, text
    adding in new view Exons DeNovo
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra
  • lines changed 2, context: html, text, full: html, text
    fixes to prep for qa
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
  • lines changed 325, context: html, text, full: html, text
    removing dccRep
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeReg.ra
  • lines changed 87, context: html, text, full: html, text
    cloned over TfbsCLustered table and revoked old one.
  • lines changed 2, context: html, text, full: html, text
    added in full fileName
  • lines changed 5, context: html, text, full: html, text
    added in md5sums
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 2, context: html, text, full: html, text
    moving dev tracks to new cell tiers
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra
  • lines changed 1010, context: html, text, full: html, text
    fixes to prep for qa
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra
  • lines changed 551, context: html, text, full: html, text
    moving dev tracks to new cell tiers
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.release3.ra
  • lines changed 1049, context: html, text, full: html, text
    moving dev tracks to new cell tiers
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.ra
  • lines changed 143, context: html, text, full: html, text
    moving dev tracks to new cell tiers
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.release2.ra
  • lines changed 78, context: html, text, full: html, text
    moving dev tracks to new cell tiers
• src/hg/makeDb/trackDb/human/hg19/wgEncodeReg.release2.ra
  • lines changed 1, context: html, text, full: html, text
    forgot to incldue the modified trackDb
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra
  • lines changed 199, context: html, text, full: html, text
    moving dev tracks to new cell tiers
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra
  • lines changed 628, context: html, text, full: html, text
    moving dev tracks to new cell tiers
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra
  • lines changed 672, context: html, text, full: html, text
    moving dev tracks to new cell tiers
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwTfbs.release4.ra
  • lines changed 3581, context: html, text, full: html, text
    moving dev tracks to new cell tiers