Commits for wong

v268_preview to v268_preview2 (2012-05-22 to 2012-05-29) v268

• removing dccRep
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra - lines changed 325, context: html, text, full: html, text
• changing the way current trackDb is determined more robust, and doesn't fail when there's no alpha
  • python/lib/ucscGb/encode/track.py - lines changed 13, context: html, text, full: html, text
• fixing header
  • src/hg/encode/encodeQaPrepareRelease/encodeQaPrepareRelease - lines changed 3, context: html, text, full: html, text
• added in functionality to get the link to the original journal (or as close as ncbi does)
  • src/hg/encode/qaAddTrackReferences/qaAddTrackReferences - lines changed 17, context: html, text, full: html, text
• minor maintenence
  • src/hg/encode/qaUpdateMetadata/qaUpdateMetadata - lines changed 2, context: html, text, full: html, text
  • src/hg/encode/raMerge/raMerge - lines changed 3, context: html, text, full: html, text
• adding in new view Exons DeNovo
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 6, context: html, text, full: html, text
• moving dev tracks to new cell tiers
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 551, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.release3.ra - lines changed 1049, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.ra - lines changed 143, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.release2.ra - lines changed 78, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 199, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra - lines changed 628, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra - lines changed 672, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwTfbs.release4.ra - lines changed 3581, context: html, text, full: html, text
• updating notes for cshl long
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlLongRnaSeq.release2.notes - lines changed 523, context: html, text, full: html, text
• cloned over TfbsCLustered table and revoked old one.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeReg.ra - lines changed 87, context: html, text, full: html, text
• forgot to incldue the modified trackDb
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeReg.release2.ra - lines changed 1, context: html, text, full: html, text
• added in full fileName
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeReg.ra - lines changed 2, context: html, text, full: html, text
• added in md5sums
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeReg.ra - lines changed 5, context: html, text, full: html, text
• fixes to prep for qa
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlLongRnaSeq.release2.notes - lines changed 21, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra - lines changed 1010, context: html, text, full: html, text