File Changes for katrina

v269_preview2 to v269_base (2012-06-19 to 2012-06-26) v269

• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/makefile
  • lines changed 1, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeCshlShortRnaSeq.ra
  • lines changed 57, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeHelicosRnaSeq.ra
  • lines changed 9, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeHudsonalphaMethylSeq.ra
  • lines changed 214, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeHudsonalphaRnaSeq.ra
  • lines changed 18, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeMapability.ra
  • lines changed 17, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeSunyalbanyRnaGeneChip.ra
  • lines changed 20, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeYaleRNAseq.ra
  • lines changed 298, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/makefile
  • lines changed 1, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeCshlShortRnaSeq.ra
  • lines changed 57, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeHelicosRnaSeq.ra
  • lines changed 9, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeHudsonalphaMethylSeq.ra
  • lines changed 214, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeHudsonalphaRnaSeq.ra
  • lines changed 18, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeMapability.ra
  • lines changed 17, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeSunyalbanyRnaGeneChip.ra
  • lines changed 20, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeYaleRNAseq.ra
  • lines changed 298, context: html, text, full: html, text
    cleaning up hg18 metadata - adding expIds, composite obj, removing ripTgtProtein. For HudnsonalphaMethylSeq, also adding labExpId, protocol, removing parentTable, adding dccInternalNotes. Deleting public & beta wgEncodeYaleRNAseq.rafiles because this is not on beta or pub anymore, or even dev actually, also removing the .ra file from the public and beta makefiles.
    
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 2, context: html, text, full: html, text
    removing Gencode V11 from public and beta and leaving it on alpha, redmine #8137