File Changes for wong

v269_preview2 to v269_base (2012-06-19 to 2012-06-26) v269

• src/hg/encode/encodeMkFilesList/encodeMkFilesList
  • lines changed 3, context: html, text, full: html, text
    bams behave oddly sometimes
• src/hg/encode/getTrackReferences/getTrackReferences
  • lines changed 1, context: html, text, full: html, text
    forgot a period
  • lines changed 2, context: html, text, full: html, text
    fixed the name in the usage
  • lines changed 2, context: html, text, full: html, text
    removeing auto help
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
  • lines changed 11, context: html, text, full: html, text
    adding mouse CRG lab
  • lines changed 22, context: html, text, full: html, text
    correcting crg-m error
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra
  • lines changed 460, context: html, text, full: html, text
    replace spikeins with non compressed versions
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra
  • lines changed 1457, context: html, text, full: html, text
    added in new tracks
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra
  • lines changed 553, context: html, text, full: html, text
    added in enw open chrom dnase tracks
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 1, context: html, text, full: html, text
    added in enw open chrom dnase tracks
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra
  • lines changed 555, context: html, text, full: html, text
    adding in new tracks, and correcting some trackDB errors
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.release3.ra
  • lines changed 256, context: html, text, full: html, text
    added in new tracks
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.patch.ra
  • lines changed 1847, context: html, text, full: html, text
    removing open chrom dnase patch
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.release3.ra
  • lines changed 98, context: html, text, full: html, text
    added in enw open chrom dnase tracks
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release6.ra
  • lines changed 5396, context: html, text, full: html, text
    starting first version of uw dnase release 6 (data is coming in soon)
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeMapability.ra
  • lines changed 16, context: html, text, full: html, text
    corrected mdb erms to be mousey