Commits for wong

v269_preview2 to v269_base (2012-06-19 to 2012-06-26) v269

• adding mouse CRG lab
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 11, context: html, text, full: html, text
• corrected mdb erms to be mousey
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeMapability.ra - lines changed 16, context: html, text, full: html, text
• correcting crg-m error
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 22, context: html, text, full: html, text
• forgot a period
  • src/hg/encode/getTrackReferences/getTrackReferences - lines changed 1, context: html, text, full: html, text
• fixed the name in the usage
  • src/hg/encode/getTrackReferences/getTrackReferences - lines changed 2, context: html, text, full: html, text
• removeing auto help
  • src/hg/encode/getTrackReferences/getTrackReferences - lines changed 2, context: html, text, full: html, text
• adding in new tracks, and correcting some trackDB errors
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 555, context: html, text, full: html, text
• starting first version of uw dnase release 6 (data is coming in soon)
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release6.ra - lines changed 5396, context: html, text, full: html, text
• added in new tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 1457, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.release3.ra - lines changed 256, context: html, text, full: html, text
• removing open chrom dnase patch
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.patch.ra - lines changed 1847, context: html, text, full: html, text
• added in enw open chrom dnase tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 553, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.release3.ra - lines changed 98, context: html, text, full: html, text
• replace spikeins with non compressed versions
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 460, context: html, text, full: html, text
• bams behave oddly sometimes
  • src/hg/encode/encodeMkFilesList/encodeMkFilesList - lines changed 3, context: html, text, full: html, text