Commits for wong

v271_preview2 to v271_base (2012-07-31 to 2012-08-07) v271

• added in known expIds
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 137, context: html, text, full: html, text
• added in the rest of the expIds
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 469, context: html, text, full: html, text
• added in md5sums and added treatment as a expVar
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 380, context: html, text, full: html, text
• adding in Broad Histone tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 877, context: html, text, full: html, text
• fixed labels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.release3.ra - lines changed 813, context: html, text, full: html, text
• adding in bed cluster
  • src/hg/encode/encodeValidate/doEncodeValidate.pl - lines changed 4, context: html, text, full: html, text
• added in the last of the missing cshl long mouse tracks
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 729, context: html, text, full: html, text
• added in md5sums
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 641, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 47, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 172, context: html, text, full: html, text
• fixed notes
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeGisRnaPet.release2.notes - lines changed 16, context: html, text, full: html, text
• updating notes for uw dgf
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwDgf.release4.notes - lines changed 189, context: html, text, full: html, text
• added in expIds for uw dgf
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDgf.ra - lines changed 265, context: html, text, full: html, text
• first attempt at labels for uw dgf
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 71, context: html, text, full: html, text
• removing unnecessary lines
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 208, context: html, text, full: html, text
• last of the labels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 4, context: html, text, full: html, text
• adding rep tags for uw dgf
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 4, context: html, text, full: html, text
• more shortlabels for uw dgf
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 5, context: html, text, full: html, text
• removed filter composite
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 43, context: html, text, full: html, text
• spacing issues in the text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 4722, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• added in new tracks
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.release3.ra - lines changed 747, context: html, text, full: html, text
• added in new release date
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.html - lines changed 1, context: html, text, full: html, text
• adding in Broad Histone notes
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeBroadHistone.release3.notes - lines changed 3322, context: html, text, full: html, text
• removing default peak options box
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.release3.ra - lines changed 1, context: html, text, full: html, text
• fixed for qa dgf html
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.html - lines changed 11, context: html, text, full: html, text
• fixing html link
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.html - lines changed 1, context: html, text, full: html, text
• added proper link, made draw window 100m
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 1, context: html, text, full: html, text
• max window to 250M to encompass chr1
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 1, context: html, text, full: html, text
• fixed window again
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 1, context: html, text, full: html, text
• added version number to bowtie
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.html - lines changed 2, context: html, text, full: html, text
• added version number to bowtie perperly this time
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.html - lines changed 1, context: html, text, full: html, text
• added in mdt5sums and some expIds
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 216, context: html, text, full: html, text
• added in dateUnrestricted dates
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 56, context: html, text, full: html, text
• fixes for QA for broad histone
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 1406, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.release3.ra - lines changed 111, context: html, text, full: html, text
• html fixes
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.release3.html - lines changed 14, context: html, text, full: html, text
• more qa fixes for broad histone
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.release3.ra - lines changed 319, context: html, text, full: html, text
• html fixes for broad
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.release3.html - lines changed 2, context: html, text, full: html, text