File Changes for cricket

v270_base to v271_preview (2012-07-17 to 2012-07-24) v271

• src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlShortRnaSeq.release3.notes
  • lines changed 123, context: html, text, full: html, text
    Revising notes file to have supplemental and to have the correct attic lists
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeHaibMethylRrbs.release3.notes
  • lines changed 955, context: html, text, full: html, text
    Notes file for release3 for Haib RRBS
  • lines changed 5, context: html, text, full: html, text
    Needed to sort out some attic confusion
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeUncBsuProt.release1.notes
  • lines changed 52, context: html, text, full: html, text
    Redoing release 1 notes in correct version
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra
  • lines changed 4857, context: html, text, full: html, text
    Adding new genedenovos and transcript denovos
  • lines changed 54, context: html, text, full: html, text
    Adding new submissions
  • lines changed 621, context: html, text, full: html, text
    adding expIds
  • lines changed 10, context: html, text, full: html, text
    Revoking LID47806
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibMethylRrbs.ra
  • lines changed 520, context: html, text, full: html, text
    Removed origAssembly, added md5sums, swapped some attic tags, added some new stanzas
  • lines changed 2, context: html, text, full: html, text
    Needed to sort out some attic confusion
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 14, context: html, text, full: html, text
    Changing tags to not have numerals or dashes in the front
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 2, context: html, text, full: html, text
    Adding new release for CSHL Long
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release3.html
  • lines changed 194, context: html, text, full: html, text
    Adding new release for CSHL Long
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release3.ra
  • lines changed 6622, context: html, text, full: html, text
    Adding new release for CSHL Long
  • lines changed 793, context: html, text, full: html, text
    Adding the Transcript Denovo stanzas commented out. There is debate on if we are to display them
  • lines changed 154, context: html, text, full: html, text
    Adding new submissions
  • lines changed 35, context: html, text, full: html, text
    Revoking LID47806
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethylRrbs.release3.html
  • lines changed 12, context: html, text, full: html, text
    Working on the release notes
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethylRrbs.release3.ra
  • lines changed 699, context: html, text, full: html, text
    Added two new experiments, pulled 6 experiments out of the attic, significantly changed the fileUI and the matrix, changed the data to 9 +
  • lines changed 16, context: html, text, full: html, text
    Needed to sort out some attic confusion
  • lines changed 91, context: html, text, full: html, text
    Fixing errors found in QA, #6773 Note22
  • lines changed 3, context: html, text, full: html, text
    Adding a few more fixes for Note 22