File Changes for wong

v272_preview2 to v272_base (2012-08-21 to 2012-08-28) v272

• src/hg/makeDb/doc/encodeDccHg19/wgEncodeOpenChromChip.release2.notes
  • lines changed 272, context: html, text, full: html, text
    adding in notes files
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeOpenChromDnase.release3.notes
  • lines changed 1591, context: html, text, full: html, text
    adding in notes files
  • lines changed 22, context: html, text, full: html, text
    updating notes for open chrom dnase
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeOpenChromFaire.release2.notes
  • lines changed 206, context: html, text, full: html, text
    adding in notes
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra
  • lines changed 250, context: html, text, full: html, text
    adding in missing tracks for haib tfbs
  • lines changed 223, context: html, text, full: html, text
    removing not used controls
  • lines changed 191, context: html, text, full: html, text
    adding expIds and accessions
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra
  • lines changed 335, context: html, text, full: html, text
    added in expIds and accessions
  • lines changed 208, context: html, text, full: html, text
    prepping tracks for approval
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra
  • lines changed 439, context: html, text, full: html, text
    prepping tracks for approval
  • lines changed 27, context: html, text, full: html, text
    adding in last missing track
  • lines changed 451, context: html, text, full: html, text
    made it so that treatment is not on by default
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra
  • lines changed 320, context: html, text, full: html, text
    added metadata
  • lines changed 83, context: html, text, full: html, text
    added in md5sums
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.release3.ra
  • lines changed 45, context: html, text, full: html, text
    adding in missing tracks for haib tfbs
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.html
  • lines changed 10, context: html, text, full: html, text
    fixed contacts page
  • lines changed 2, context: html, text, full: html, text
    qa fixes for open chrom chip
  • lines changed 14, context: html, text, full: html, text
    fixed things for qa
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.ra
  • lines changed 100, context: html, text, full: html, text
    fixed things for qa
  • lines changed 36, context: html, text, full: html, text
    updated density sig labels to be consistent
  • lines changed 36, context: html, text, full: html, text
    making the S lower case
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.release3.html
  • lines changed 320, context: html, text, full: html, text
    moving html file over
  • lines changed 25, context: html, text, full: html, text
    qa html fixes
  • lines changed 2, context: html, text, full: html, text
    more qa fixes
  • lines changed 2, context: html, text, full: html, text
    more label fixes, and html fixes
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.release3.ra
  • lines changed 12, context: html, text, full: html, text
    prepping tracks for approval
  • lines changed 323, context: html, text, full: html, text
    first pass at labels and other qa things
  • lines changed 262, context: html, text, full: html, text
    more qa fixes for duke dnase
  • lines changed 4, context: html, text, full: html, text
    more label corrections
  • lines changed 0, context: html, text, full: html, text
    label change for iPS NIHi7
  • lines changed 0, context: html, text, full: html, text
    reversing label change for iPS NIHi7
  • lines changed 2, context: html, text, full: html, text
    changinh over html and release date
  • lines changed 155, context: html, text, full: html, text
    redid short labels for QA
  • lines changed 19, context: html, text, full: html, text
    more label fixes, and html fixes
  • lines changed 8, context: html, text, full: html, text
    adding in last missing track
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.release2.ra
  • lines changed 73, context: html, text, full: html, text
    adding in last of the tracks
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeSydhHist.ra
  • lines changed 73, context: html, text, full: html, text
    changing labs over to Stanford-m
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeSydhTfbs.ra
  • lines changed 133, context: html, text, full: html, text
    changing labs over to Stanford-m
• src/hg/utils/automation/Encode.pm
  • lines changed 19, context: html, text, full: html, text
    updating Encode.pm file type detection mechanisms