Commits for max
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v273_preview2 to v273_base (2012-09-11 to 2012-09-18) v273
- adding ignore case option to faFilter
- src/utils/faFilter/faFilter.c - lines changed 7, context: html, text, full: html, text
- src/utils/faFilter/tests/expected/testUniqIc.fa - lines changed 2, context: html, text, full: html, text
- src/utils/faFilter/tests/input/uniqIc.fa - lines changed 4, context: html, text, full: html, text
- src/utils/faFilter/tests/makefile - lines changed 6, context: html, text, full: html, text
- added optional (chrom,start,end)-column matching to itemDetailsHtmlTable code
- fix to (chrom,start,end)-check
- added warning to makeGenomeDb.pl scream if chromosome names are too long
- src/hg/utils/automation/makeGenomeDb.pl - lines changed 1, context: html, text, full: html, text
- fixed bug in faFilter where -namePatList did not do anything
- src/utils/faFilter/faFilter.c - lines changed 2, context: html, text, full: html, text
- src/utils/faFilter/tests/expected/testPatList.fa - lines changed 6, context: html, text, full: html, text
- src/utils/faFilter/tests/input/basicIds.lst - lines changed 3, context: html, text, full: html, text
- src/utils/faFilter/tests/makefile - lines changed 8, context: html, text, full: html, text
- added -bedPos option and a test for it
- src/utils/twoBitToFa/makefile - lines changed 1, context: html, text, full: html, text
- src/utils/twoBitToFa/tests/expected/bed_ml_partial_list.fa - lines changed 4, context: html, text, full: html, text
- src/utils/twoBitToFa/tests/input/seqlist2.bed - lines changed 2, context: html, text, full: html, text
- src/utils/twoBitToFa/twoBitToFa.c - lines changed 19, context: html, text, full: html, text
- help change for twoBitToFa.c
- src/utils/twoBitToFa/twoBitToFa.c - lines changed 1, context: html, text, full: html, text
- bugfix: -noMask had no effect when -bed was set
- src/utils/twoBitToFa/twoBitToFa.c - lines changed 2, context: html, text, full: html, text
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