File Changes for angie

v274_preview to v274_preview2 (2012-09-25 to 2012-10-02) v274

• src/hg/hgTables/bigBed.c
  • lines changed 1, context: html, text, full: html, text
    hgTables schema page was using hub (sub)trackDb's without ->html;refactored html-fetching code out of hubConnectAddHubForTrackAndFindTdb
    and into new hubConnectAddDescription. Also fixed the code to work
    for subtracks (instead of assigning tdb->html to parents, if tdb->html
    is empty, recurse up parents until we find a non-empty ->html and assign
    that to tdb).
    
• src/hg/hgTables/schema.c
  • lines changed 12, context: html, text, full: html, text
    hgTables schema page was using hub (sub)trackDb's without ->html;refactored html-fetching code out of hubConnectAddHubForTrackAndFindTdb
    and into new hubConnectAddDescription. Also fixed the code to work
    for subtracks (instead of assigning tdb->html to parents, if tdb->html
    is empty, recurse up parents until we find a non-empty ->html and assign
    that to tdb).
    
• src/hg/inc/hubConnect.h
  • lines changed 4, context: html, text, full: html, text
    hgTables schema page was using hub (sub)trackDb's without ->html;refactored html-fetching code out of hubConnectAddHubForTrackAndFindTdb
    and into new hubConnectAddDescription. Also fixed the code to work
    for subtracks (instead of assigning tdb->html to parents, if tdb->html
    is empty, recurse up parents until we find a non-empty ->html and assign
    that to tdb).
    
• src/hg/lib/dhcHumDerDenAnc.as
  • lines changed 27, context: html, text, full: html, text
    Track #8886 (Denisova high-cov): Added composite track from Denisovaanalysis: sites where humans have a derived allele relative to chimp,
    gorilla, and/or orangutan, and Denisova had the ancestral allele;
    plus VEP annotations of predicted functional consequence.
    
• src/hg/lib/hubConnect.c
  • lines changed 47, context: html, text, full: html, text
    hgTables schema page was using hub (sub)trackDb's without ->html;refactored html-fetching code out of hubConnectAddHubForTrackAndFindTdb
    and into new hubConnectAddDescription. Also fixed the code to work
    for subtracks (instead of assigning tdb->html to parents, if tdb->html
    is empty, recurse up parents until we find a non-empty ->html and assign
    that to tdb).
    
• src/hg/makeDb/doc/hg19.txt
  • lines changed 191, context: html, text, full: html, text
    Track #8886 (Denisova high-cov): Added composite track from Denisovaanalysis: sites where humans have a derived allele relative to chimp,
    gorilla, and/or orangutan, and Denisova had the ancestral allele;
    plus VEP annotations of predicted functional consequence.
    
• src/hg/makeDb/trackDb/human/hg19/trackDb.denisova.ra
  • lines changed 394, context: html, text, full: html, text
    Track #8886 (Denisova high-cov): Added composite track from Denisovaanalysis: sites where humans have a derived allele relative to chimp,
    gorilla, and/or orangutan, and Denisova had the ancestral allele;
    plus VEP annotations of predicted functional consequence.