File Changes for hiram
switch to commits view, user indexv275_preview to v275_preview2 (2012-10-16 to 2012-10-23) v275
- src/hg/geneBounds/estLibStats/makefile
- lines changed 1, context: html, text, full: html, text
rearrange -lm to be after mysqllibs redmine 9101
- src/hg/makeDb/doc/allMis1.txt
- lines changed 367, context: html, text, full: html, text
trying to get a unique RM library from Robert Hubley
- src/hg/makeDb/doc/blastTab.txt
- lines changed 399, context: html, text, full: html, text
drBlastTab reload for danRer7 Ensembl update
- src/hg/makeDb/doc/braFlo2.txt
- lines changed 418, context: html, text, full: html, text
starting new Lancelet assembly v2.0
- lines changed 46, context: html, text, full: html, text
done with genbank alignments
- lines changed 24, context: html, text, full: html, text
lastz Lamprey <-> Lancelet
- src/hg/makeDb/doc/cerSim1.txt
- lines changed 7, context: html, text, full: html, text
ready for default position and pushQ entry
- src/hg/makeDb/doc/hg19.txt
- lines changed 137, context: html, text, full: html, text
running lastz for petMar2 and cerSim1
- src/hg/makeDb/doc/mm10.txt
- lines changed 29, context: html, text, full: html, text
adding cytoband tables for Chromosome Band track
- lines changed 6, context: html, text, full: html, text
better generic location for these ideogram files
- src/hg/makeDb/doc/petMar1.txt
- lines changed 19, context: html, text, full: html, text
petMar2 liftOver constructed and blanks at ends of lines removed
- src/hg/makeDb/doc/petMar2.txt
- lines changed 46, context: html, text, full: html, text
lastz Lamprey <-> Lancelet
- src/hg/makeDb/genbank/etc/align.dbs
- src/hg/makeDb/genbank/etc/genbank.conf
- lines changed 17, context: html, text, full: html, text
adding petMar2 Lamprey redmine 9153
- lines changed 17, context: html, text, full: html, text
adding braFlo2 - Lancelet - Branchiostoma floridae
- src/hg/makeDb/genbank/etc/hgwdev.dbs
- src/hg/makeDb/genbank/src/lib/gbGenome.c
- lines changed 1, context: html, text, full: html, text
adding additional Lancelet names for Branchiostoma
- src/hg/makeDb/hgGcPercent/makefile
- lines changed 8, context: html, text, full: html, text
adding hgGcPercent to the userApps delivery
- src/hg/makeDb/schema/all.joiner
- lines changed 31, context: html, text, full: html, text
adding cerSim1 and petMar2 completely clean
- lines changed 1, context: html, text, full: html, text
do not need to check refLink with kgProtAlias on dm3
- src/hg/makeDb/trackDb/lancelet/braFlo2/description.html
- lines changed 63, context: html, text, full: html, text
adding Lancelet v2.0 braFlo2 to the build
- src/hg/makeDb/trackDb/lancelet/braFlo2/gap.html
- lines changed 31, context: html, text, full: html, text
adding Lancelet v2.0 braFlo2 to the build
- src/hg/makeDb/trackDb/lancelet/braFlo2/gold.html
- lines changed 34, context: html, text, full: html, text
adding Lancelet v2.0 braFlo2 to the build
- src/hg/makeDb/trackDb/lancelet/braFlo2/trackDb.ra
- lines changed 8, context: html, text, full: html, text
adding Lancelet v2.0 braFlo2 to the build
- src/hg/makeDb/trackDb/lizard/anoCar1/trackDb.ra
- lines changed 2, context: html, text, full: html, text
override for quality table maximum limit
- src/hg/makeDb/trackDb/makefile
- lines changed 1, context: html, text, full: html, text
adding petMar2 to the build
- lines changed 1, context: html, text, full: html, text
adding Lancelet v2.0 braFlo2 to the build
- src/hg/makeDb/trackDb/mouse/mm10/trackDb.euarchontoglireChainNet.ra
- lines changed 242, context: html, text, full: html, text
renaming primatesChainNet to euarchontoglireChainNet
- src/hg/makeDb/trackDb/mouse/mm10/trackDb.gliresChainNet.ra
- lines changed 17, context: html, text, full: html, text
renaming primatesChainNet to euarchontoglireChainNet
- src/hg/makeDb/trackDb/mouse/mm10/trackDb.primatesChainNet.ra
- lines changed 226, context: html, text, full: html, text
renaming primatesChainNet to euarchontoglireChainNet
- src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra
- lines changed 1, context: html, text, full: html, text
renaming primatesChainNet to euarchontoglireChainNet
- src/hg/utils/automation/configFiles/cerSim1.config.ra
- lines changed 23, context: html, text, full: html, text
adding recent new assemblies, rhino, chinchilla, lamprey
- src/hg/utils/automation/configFiles/chiLan1.config.ra
- lines changed 23, context: html, text, full: html, text
adding recent new assemblies, rhino, chinchilla, lamprey
- src/hg/utils/automation/configFiles/petMar2.config.ra
- lines changed 23, context: html, text, full: html, text
adding recent new assemblies, rhino, chinchilla, lamprey
- src/hg/utils/automation/configFiles/rn5.config.ra
- src/hg/utils/bedExtendRanges/makefile
- lines changed 6, context: html, text, full: html, text
adding bedExtendRanges and makeTableList to the build
- src/hg/utils/makefile
- lines changed 2, context: html, text, full: html, text
adding bedExtendRanges and makeTableList to the build
- src/makefile
- lines changed 3, context: html, text, full: html, text
adding hgGcPercent to the userApps delivery
- src/product/README.building.source
- lines changed 12, context: html, text, full: html, text
add note about dlopen routines in library -ldl
- src/utils/bedGraphToBigWig/bedGraphToBigWig.c
- lines changed 1, context: html, text, full: html, text
adding hgGcPercent to the userApps delivery
- src/utils/faRandomize/faRandomize.c
- lines changed 8, context: html, text, full: html, text
standardize usage message to place into the build
- src/utils/faRandomize/makefile
- lines changed 3, context: html, text, full: html, text
standardize usage message to place into the build
- src/utils/makefile
- lines changed 1, context: html, text, full: html, text
adding faRandomize to the build
- lines changed 1, context: html, text, full: html, text
adding paraSync to the build
- src/utils/ncbi/createNcbiCytoBand.pl
- lines changed 3, context: html, text, full: html, text
update to handle mm10 correctly
- src/utils/ncbi/cytoBandVerify.pl
- lines changed 1, context: html, text, full: html, text
update to handle mm10 correctly
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