File Changes for kate
switch to commits view, user indexv278_base to v279_preview (2013-01-22 to 2013-01-29) v279
- src/hg/hgc/peakClusters.c
- lines changed 7, context: html, text, full: html, text
Sorting items in cluster by metadata made more general
- src/hg/inc/mdb.h
- lines changed 5, context: html, text, full: html, text
1. hgFileUi now only prints data restriction warning if the composite has a restricted object. 2. Add -cv option to mdbPrint to allow alternate CV file. 2. 3. A step toward modularizing restriction timestamp handling. #10006 Mute File UI loud warnings when they are not applicable.
- src/hg/lib/cv.c
- lines changed 2, context: html, text, full: html, text
1. hgFileUi now only prints data restriction warning if the composite has a restricted object. 2. Add -cv option to mdbPrint to allow alternate CV file. 2. 3. A step toward modularizing restriction timestamp handling. #10006 Mute File UI loud warnings when they are not applicable.
- src/hg/lib/fileUi.c
- lines changed 18, context: html, text, full: html, text
1. hgFileUi now only prints data restriction warning if the composite has a restricted object. 2. Add -cv option to mdbPrint to allow alternate CV file. 2. 3. A step toward modularizing restriction timestamp handling. #10006 Mute File UI loud warnings when they are not applicable.
- src/hg/lib/hui.c
- lines changed 2, context: html, text, full: html, text
1. hgFileUi now only prints data restriction warning if the composite has a restricted object. 2. Add -cv option to mdbPrint to allow alternate CV file. 2. 3. A step toward modularizing restriction timestamp handling. #10006 Mute File UI loud warnings when they are not applicable.
- src/hg/lib/mdb.c
- lines changed 9, context: html, text, full: html, text
1. hgFileUi now only prints data restriction warning if the composite has a restricted object. 2. Add -cv option to mdbPrint to allow alternate CV file. 2. 3. A step toward modularizing restriction timestamp handling. #10006 Mute File UI loud warnings when they are not applicable.
- src/hg/makeDb/doc/encodeRegHg19.txt
- lines changed 34, context: html, text, full: html, text
Add downloads. Rework trackDb organization and track labels to address versioning, with input from Brooke. #9954 ENCODE Regulation: DNase Clusters V2
- lines changed 12, context: html, text, full: html, text
Add metaDb for V2 (needed to activate downloads link). Track #9954: ENCODE Regulation: DNase Clusters V2
- src/hg/makeDb/mdbUpdate/mdbPrint.c
- lines changed 9, context: html, text, full: html, text
1. hgFileUi now only prints data restriction warning if the composite has a restricted object. 2. Add -cv option to mdbPrint to allow alternate CV file. 2. 3. A step toward modularizing restriction timestamp handling. #10006 Mute File UI loud warnings when they are not applicable.
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/.nfs000000001c22961e000002bd
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/acc.out
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/new.txt
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgDnaseUniform.ra
- lines changed 14, context: html, text, full: html, text
Comment out multiple accession lists until ENCODE experiment matrix can handle them. MLQ #10028: ENCODE Experiment matrix doesn't load
- lines changed 15, context: html, text, full: html, text
Add magic number to metaDb after removing accession lists. MLQ #10028: ENCODE Experiment matrix doesn't load
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRegDnaseClustered.ra
- lines changed 8, context: html, text, full: html, text
Add metaDb for V2 (needed to activate downloads link). Track #9954: ENCODE Regulation: DNase Clusters V2
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
- lines changed 2, context: html, text, full: html, text
Add downloads. Rework trackDb organization and track labels to address versioning, with input from Brooke. #9954 ENCODE Regulation: DNase Clusters V2
- src/hg/makeDb/trackDb/human/hg19/wgEncodeReg.ra
- lines changed 2, context: html, text, full: html, text
ENCODE Regulation release 2 changes. Retiring the .releaseN.ra files. Track #7526: ENCODE Regulation track update
- lines changed 20, context: html, text, full: html, text
Retiring the supertrack .releaseN.ra files. Track #7526: ENCODE Regulation track update
- lines changed 32, context: html, text, full: html, text
Add DNase Clusters track update (renaming old to V1). Track #7526: ENCODE Regulation track update
- src/hg/makeDb/trackDb/human/hg19/wgEncodeReg.release2.ra
- lines changed 333, context: html, text, full: html, text
Retiring the supertrack .releaseN.ra files. Track #7526: ENCODE Regulation track update
- src/hg/makeDb/trackDb/human/hg19/wgEncodeReg.release3.ra
- lines changed 348, context: html, text, full: html, text
Retiring the supertrack .releaseN.ra files. Track #7526: ENCODE Regulation track update
- src/hg/makeDb/trackDb/human/hg19/wgEncodeReg.release4.ra
- lines changed 23, context: html, text, full: html, text
Add downloads. Rework trackDb organization and track labels to address versioning, with input from Brooke. #9954 ENCODE Regulation: DNase Clusters V2
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRegDnaseClustered.release2.html
- lines changed 30, context: html, text, full: html, text
Add downloads. Rework trackDb organization and track labels to address versioning, with input from Brooke. #9954 ENCODE Regulation: DNase Clusters V2
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRegDnaseClusteredV2.html
- lines changed 51, context: html, text, full: html, text
Add downloads. Rework trackDb organization and track labels to address versioning, with input from Brooke. #9954 ENCODE Regulation: DNase Clusters V2
- lines changed 2, context: html, text, full: html, text
Add link to ENCODE portal to track description (non-standard ENCODE track so it doesn't show in top menu bar. Track #9954 ENCODE Regulation: DNase Clusters V2
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