Commits for kate

v280_base to v281_preview (2013-03-05 to 2013-03-12) v281

• Metadata for ENCODE Uniform TFBS track. RM 10042
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 11799, context: html, text, full: html, text
• temporary joke image (ref Grauer et al)
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 2, context: html, text, full: html, text
• Add metadata generation
  • src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 108, context: html, text, full: html, text
• Add labs. Reformat long labels using ideas from analysis hub
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 1391, context: html, text, full: html, text
• Add track description. #10042 - ENCODE Uniform Tfbs
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.html - lines changed 108, context: html, text, full: html, text
• Changes from Brian L. code review (clean-up remaining in-line style directives)
  • src/hg/htdocs/ENCODE/downloads.html - lines changed 10, context: html, text, full: html, text
• Add target metadata. Remove dummy dccAccessions. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 1884, context: html, text, full: html, text
• Add track description. Add target to metadata. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 23, context: html, text, full: html, text
• Add link to cv.ra file. ENCODE Docs #10346: Making cv.ra accessible
  • src/hg/htdocs/ENCODE/downloads.html - lines changed 4, context: html, text, full: html, text
• Adjust description of segmentation track, responding to request by Michael Hoffman of AWG. ENCODE Docs #10047: Portal - Add section to downloads for analysis fiels on EBI track hub
  • src/hg/htdocs/ENCODE/downloads.html - lines changed 1, context: html, text, full: html, text
• Add DCC accessions. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 695, context: html, text, full: html, text
• Add accessions to metadata. Rename files for downloads. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 32, context: html, text, full: html, text
• Trim long labels to proper length. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 107, context: html, text, full: html, text
• Trim short labels. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 112, context: html, text, full: html, text
• Add lab identifier to short labels to distinguish same experiment from different labs. h=HudsonAlpha, s=Stanford, t=UTexas-Austin, w=UWashington, c=USC, v=Harvard, y=Yale, b=Broad. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 141, context: html, text, full: html, text
• Massage labels. Start downloads. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 32, context: html, text, full: html, text
• Tweak default on subtracks. ENCODE Track #10042: Uniform TFBS
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 109, context: html, text, full: html, text
• Merge branch 'awgTfbs'