File Changes for galt

v285_preview2 to v285_base (2013-06-11 to 2013-06-18) v285

• src/hg/encode/encodeExp/encodeExp.c
  • lines changed 1, context: html, text, full: html, text
    removing unneeded fix-sqli functions
• src/hg/encode3/encodeDataWarehouse/edwWebRegisterScript/edwWebRegisterScript.c
  • lines changed 1, context: html, text, full: html, text
    getting rid of unintended use of sqlEscapeString -- should be cgiEncode
• src/hg/hgTracks/pubsTracks.c
  • lines changed 1, context: html, text, full: html, text
    improving comments, making comments consistent between jksql.c,h and fixing one reference to a renamed function in pubsTracks.c
• src/hg/hgc/ccdsClick.c
  • lines changed 1, context: html, text, full: html, text
    removing unneeded cartWebEnd calls that cause the error popWarnHandler underflow
• src/hg/hgc/gencodeClick.c
  • lines changed 1, context: html, text, full: html, text
    removing unneeded cartWebEnd calls that cause the error popWarnHandler underflow
• src/hg/hgc/mgcClick.c
  • lines changed 1, context: html, text, full: html, text
    removing unneeded cartWebEnd calls that cause the error popWarnHandler underflow
• src/hg/hgc/peakClusters.c
  • lines changed 1, context: html, text, full: html, text
    removing unneeded fix-sqli functions
  • lines changed 2, context: html, text, full: html, text
    removing unneeded cartWebEnd calls that cause the error popWarnHandler underflow
• src/hg/hgc/regMotif.c
  • lines changed 1, context: html, text, full: html, text
    fixed multiple NOSQLINJ tag error by using sqlSafefFrag instead of sqlSafef
• src/hg/hgc/retroClick.c
  • lines changed 1, context: html, text, full: html, text
    removing unneeded cartWebEnd calls that cause the error popWarnHandler underflow
• src/hg/inc/jksql.h
  • lines changed 20, context: html, text, full: html, text
    removing unneeded fix-sqli functions
  • lines changed 42, context: html, text, full: html, text
    improving comments, making comments consistent between jksql.c,h and fixing one reference to a renamed function in pubsTracks.c
• src/hg/lib/cart.c
  • lines changed 1, context: html, text, full: html, text
    removing unneeded fix-sqli functions
• src/hg/lib/ccdsInfo.c
  • lines changed 3, context: html, text, full: html, text
    needed %-s for where clause
• src/hg/lib/hgFind.c
  • lines changed 17, context: html, text, full: html, text
    cleanup debug stuff
• src/hg/lib/jksql.c
  • lines changed 10, context: html, text, full: html, text
    not getting the desired behavior on stackdump
  • lines changed 145, context: html, text, full: html, text
    removing unneeded fix-sqli functions
  • lines changed 34, context: html, text, full: html, text
    extending sqlCheckIdentifiersList to support just one literal '.' since it is used by hgTables/bedList.c::bedSqlFieldsExceptForChrom()
  • lines changed 37, context: html, text, full: html, text
    improving comments, making comments consistent between jksql.c,h and fixing one reference to a renamed function in pubsTracks.c
• src/hg/lib/joiner.c
  • lines changed 3, context: html, text, full: html, text
    fixing bug related to incorrect detection of wildcards in table names and prefixes
• src/hg/lib/mdb.c
  • lines changed 2, context: html, text, full: html, text
    removing unneeded fix-sqli functions
• src/hg/lib/tests/expected/sqlCheck/sqlCheck.5
  • lines changed 1, context: html, text, full: html, text
    removing unneeded fix-sqli functions
• src/hg/lib/tests/expected/sqlCheck/sqlCheck.6
  • lines changed 3, context: html, text, full: html, text
    removing unneeded fix-sqli functions
• src/hg/lib/tests/expected/sqlCheck/sqlCheck.9
  • lines changed 1, context: html, text, full: html, text
    extending sqlCheckIdentifiersList to support just one literal '.' since it is used by hgTables/bedList.c::bedSqlFieldsExceptForChrom()
• src/hg/lib/tests/sqlCheck.c
  • lines changed 6, context: html, text, full: html, text
    removing unneeded fix-sqli functions
  • lines changed 5, context: html, text, full: html, text
    extending sqlCheckIdentifiersList to support just one literal '.' since it is used by hgTables/bedList.c::bedSqlFieldsExceptForChrom()
• src/hg/lib/tests/sqlCheck.mk
  • lines changed 4, context: html, text, full: html, text
    removing unneeded fix-sqli functions
  • lines changed 2, context: html, text, full: html, text
    extending sqlCheckIdentifiersList to support just one literal '.' since it is used by hgTables/bedList.c::bedSqlFieldsExceptForChrom()