Commits for hiram
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v284_base to v285_preview (2013-05-27 to 2013-06-04) v285
- make sure bin exists before any of the builds start here refs #9149
- improve usage message to include with userUtils refs #9149
- src/utils/addCols/addCols.c - lines changed 4, context: html, text, full: html, text
- correct usage message to include with userUtils refs #9149
- src/utils/addCols/addCols.c - lines changed 3, context: html, text, full: html, text
- improve usage message to include with userUtils refs #9149
- src/utils/aveCols/aveCols.c - lines changed 3, context: html, text, full: html, text
- improve usage message to include with userUtils refs #9149
- src/utils/addCols/addCols.c - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
- adding addCols and aveCols to the userUtils build refs #9149
- adding to the userUtils build refs #9149
- src/hg/mouseStuff/makefile - lines changed 6, context: html, text, full: html, text
- src/hg/pslToChain/makefile - lines changed 14, context: html, text, full: html, text
- src/utils/toLower/toLower.c - lines changed 2, context: html, text, full: html, text
- src/utils/toUpper/toUpper.c - lines changed 2, context: html, text, full: html, text
- add note about contacting UCSC refs #9149
- adding mesAur1, lepWed1, zonAlb1, anaPla1, apaSpi1, astMex1 refs #10272
- src/hg/utils/phyloTrees/103way.nh - lines changed 103, context: html, text, full: html, text
- adding mesAur1, lepWed1, zonAlb1, anaPla1, apaSpi1, astMex1 refs #10272
- src/hg/utils/phyloTrees/103way.commonNames.nh - lines changed 103, context: html, text, full: html, text
- src/hg/utils/phyloTrees/103way.scientificNames.nh - lines changed 103, context: html, text, full: html, text
- adding mesAur1, lepWed1, zonAlb1, anaPla1, apaSpi1, astMex1 refs #10272
- src/hg/utils/phyloTrees/commonNames.sh - lines changed 6, context: html, text, full: html, text
- src/hg/utils/phyloTrees/makefile - lines changed 8, context: html, text, full: html, text
- src/hg/utils/phyloTrees/scientificNames.sh - lines changed 6, context: html, text, full: html, text
- adding mesAur1, lepWed1, zonAlb1, anaPla1, apaSpi1, astMex1 refs #10272
- src/hg/utils/phyloTrees/placentals.txt - lines changed 5, context: html, text, full: html, text
- src/hg/utils/phyloTrees/vertebrates.txt - lines changed 13, context: html, text, full: html, text
- initial set of trackDb files from makeGenomeDb.pl refs #9348
- src/hg/makeDb/trackDb/shrew/sorAra2/description.html - lines changed 63, context: html, text, full: html, text
- src/hg/makeDb/trackDb/shrew/sorAra2/gap.html - lines changed 30, context: html, text, full: html, text
- src/hg/makeDb/trackDb/shrew/sorAra2/gold.html - lines changed 33, context: html, text, full: html, text
- src/hg/makeDb/trackDb/shrew/sorAra2/trackDb.ra - lines changed 8, context: html, text, full: html, text
- adding sorAra2 to the build refs #9348
- src/hg/makeDb/trackDb/makefile - lines changed 1, context: html, text, full: html, text
- initial browser built refs #9348
- src/hg/makeDb/doc/sorAra2.txt - lines changed 2029, context: html, text, full: html, text
- adding panHod1 Tibetan antelop refs 0272
- src/hg/utils/phyloTrees/104way.commonNames.nh - lines changed 104, context: html, text, full: html, text
- src/hg/utils/phyloTrees/104way.nh - lines changed 104, context: html, text, full: html, text
- src/hg/utils/phyloTrees/104way.scientificNames.nh - lines changed 104, context: html, text, full: html, text
- src/hg/utils/phyloTrees/commonNames.sh - lines changed 1, context: html, text, full: html, text
- src/hg/utils/phyloTrees/makefile - lines changed 8, context: html, text, full: html, text
- src/hg/utils/phyloTrees/scientificNames.sh - lines changed 1, context: html, text, full: html, text
- adding panHod1 Tibetan antelop refs 0272
- src/hg/utils/phyloTrees/placentals.txt - lines changed 3, context: html, text, full: html, text
- initial files from makeGenomeDb.pl refs #9693
- src/hg/makeDb/trackDb/tenrec/echTel2/description.html - lines changed 63, context: html, text, full: html, text
- src/hg/makeDb/trackDb/tenrec/echTel2/gap.html - lines changed 30, context: html, text, full: html, text
- src/hg/makeDb/trackDb/tenrec/echTel2/gold.html - lines changed 34, context: html, text, full: html, text
- src/hg/makeDb/trackDb/tenrec/echTel2/trackDb.ra - lines changed 8, context: html, text, full: html, text
- adding echTel2 to the build refs #9693
- src/hg/makeDb/trackDb/makefile - lines changed 1, context: html, text, full: html, text
- add the update of the actual userApps bits during an update refs #9149
- adding pslToChain to the userApps refs #9149
- adding pslToChain to the build refs #9149
- src/userApps/fetchKentSource.sh - lines changed 1, context: html, text, full: html, text
- masked sequence done, ready for genbank and other tracks refs #9693
- src/hg/makeDb/doc/echTel2.txt - lines changed 1985, context: html, text, full: html, text
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