Commits for steve

v290_preview2 to v290_base (2013-09-23 to 2013-09-30) v290

• Made correction to variable name for output of file date,size for gbdb on beta (redmine #6508)
  • src/utils/qa/2bitCompare - lines changed 1, context: html, text, full: html, text
• Updated environment statement
  • src/utils/qa/getJoinerKeyErrors.pl - lines changed 1, context: html, text, full: html, text
• Excluded mm10 from knownGeneOld5Id since knownGene5 never existed on mm10
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Adjusted ce2 threshold to fix joinerCheck error
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Adjusted dm1 threshold to fix joinerCheck error
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Adjusted dm2/dm3 threshold to fix joinerCheck error
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Adjusted hg17 threshold to fix joinerCheck error
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Adjusted hg18 threshold to fix joinerCheck error
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Adjusted hg19 threshold to fix joinerCheck error
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Added macEug1 to notEnsemblTranscriptId2 group to fix joinerCheck error
  • src/hg/makeDb/schema/all.joiner - lines changed 2, context: html, text, full: html, text
• Added hg16,hg17,hg18,mm7,mm8 to ensGeneDb group to fix joinerCheck error
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• Added ce4 and hg19 to the notFlyBaseGeneId group; created new flyBase2004IdDmDb group and moved the list of databases from the appropriate line of the section into the group - added ce4 and hg19 to the group; created a minCheck value for flyBase2004IdDm.mmBlatTab.query
  • src/hg/makeDb/schema/all.joiner - lines changed 5, context: html, text, full: html, text
• Added rn3 to ensGeneDb list
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text