File Changes for pauline

v294_preview2 to v294_base (2014-01-06 to 2014-01-13) v294

• src/hg/makeDb/doc/bosTau7.txt
  • lines changed 12, context: html, text, full: html, text
    Starting loading of QTL tracks for 3 farm animals refs #10954
  • lines changed 6, context: html, text, full: html, text
    Adding entries for animal QTL tracks. refs #10954
• src/hg/makeDb/doc/galGal4.txt
  • lines changed 11, context: html, text, full: html, text
    Starting loading of QTL tracks for 3 farm animals refs #10954
  • lines changed 2, context: html, text, full: html, text
    Adding entry to make QTL track appear on chicken refs #10954
  • lines changed 5, context: html, text, full: html, text
    Adding entries for animal QTL tracks. refs #10954
• src/hg/makeDb/doc/hg38.txt
  • lines changed 9, context: html, text, full: html, text
    Adding entry for liftover of temporary cytoband data from hg19.
• src/hg/makeDb/doc/susScr3.txt
  • lines changed 11, context: html, text, full: html, text
    Starting loading of QTL tracks for 3 farm animals refs #10954
  • lines changed 5, context: html, text, full: html, text
    Adding entries for animal QTL tracks. refs #10954
• src/hg/makeDb/trackDb/animalQtl.html
  • lines changed 80, context: html, text, full: html, text
    Adding description page for QTL tracks. refs#10954
• src/hg/makeDb/trackDb/chicken/galGal4/trackDb.ra
  • lines changed 4, context: html, text, full: html, text
    Adding entries for animal QTL tracks. refs #10954
• src/hg/makeDb/trackDb/cow/bosTau7/trackDb.ra
  • lines changed 4, context: html, text, full: html, text
    Adding entries for animal QTL tracks. refs #10954
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 14, context: html, text, full: html, text
    Moved 5 repeats tracks to new repeats group. refs #12284
  • lines changed 4, context: html, text, full: html, text
    Resetting priorities to move pubs to top and impose alpha order for rest of tracks. refs #12362
  • lines changed 5, context: html, text, full: html, text
    Putting settings for new combined phen+lit group down at assembly level - see note 11 refs #12362
  • lines changed 3, context: html, text, full: html, text
    Removing unneccesary lines. refs #12425
• src/hg/makeDb/trackDb/human/trackDb.ra
  • lines changed 14, context: html, text, full: html, text
    Resetting priorities to move pubs to top and impose alpha order for rest of tracks. refs #12362
• src/hg/makeDb/trackDb/pig/susScr3/trackDb.ra
  • lines changed 5, context: html, text, full: html, text
    Adding entries for animal QTL tracks. refs #10954
• src/hg/makeDb/trackDb/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    Folding pubs track into combined phen+lit group. refs #12362
  • lines changed 1, context: html, text, full: html, text
    Resetting priorities to move pubs to top and impose alpha order for rest of tracks. refs #12362
  • lines changed 2, context: html, text, full: html, text
    Putting settings for new combined phen+lit group down at assembly level - see note 11 refs #12362
  • lines changed 10, context: html, text, full: html, text
    Adding entry to make QTL track appear on chicken refs #10954
  • lines changed 2, context: html, text, full: html, text
    Adding entries for animal QTL tracks. refs #10954
  • lines changed 3, context: html, text, full: html, text
    Updating coloring for animal QTL tracks, removing lines moved to lower level. refs #10954