File Changes for max

v294_preview to v294_preview2 (2013-12-16 to 2014-01-06) v294

• src/hg/hgMirror/hgMirror
  • lines changed 902, context: html, text, full: html, text
    hgMirror is a CGI to make partial mirrors and VMs easier to setup. Itpresents the list of tracks, allows the user to select a few, prepares
    a script with udr download commands and runs them. As it requires a lot
    of write permissions and can do harm (mysql directory, gbdb directory),
    it currently does show sizes on hgwdev, but cannot write anything.
    I didn't make it part of the default "make cgi" target.
    
  • lines changed 1, context: html, text, full: html, text
    always copy one small encode table
• src/hg/hgMirror/makefile
  • lines changed 19, context: html, text, full: html, text
    hgMirror is a CGI to make partial mirrors and VMs easier to setup. Itpresents the list of tracks, allows the user to select a few, prepares
    a script with udr download commands and runs them. As it requires a lot
    of write permissions and can do harm (mysql directory, gbdb directory),
    it currently does show sizes on hgwdev, but cannot write anything.
    I didn't make it part of the default "make cgi" target.
    
• src/hg/hgTracks/factorSource.c
  • lines changed 2, context: html, text, full: html, text
    replacing a query with the more apprpriate function call (saves somelittle time in the browser box, as hdb can use the table name cache)
    
• src/hg/hgTracks/pubsTracks.c
  • lines changed 3, context: html, text, full: html, text
    fixing slightly weird code in pubs track color reading
• src/hg/hgc/pubs.c
  • lines changed 5, context: html, text, full: html, text
    removing indiv sequences link, rm #12212
• src/hg/lib/hdb.c
  • lines changed 15, context: html, text, full: html, text
    As suggested by Hiram, inversing the strategy for table name checks:First try the full table name, then the split table name. All current
    assemblies use normal, non-split tables so this saves some mysql
    queries (and saves some time in the browser box)
    
• src/hg/lib/tableList.sql
  • lines changed 11, context: html, text, full: html, text
    when I changed the makeTableList command, forgot to check in the sqltable schema for its table