File Changes for angie

v296_preview to v296_preview2 (2014-02-10 to 2014-02-17) v296

• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 123, context: html, text, full: html, text
    In snp125+ track controls, don't show options for class and validationcodes that don't appear in the table. For example, validation codes
    by-hapmap and by-1000genomes are not applicable for non-human genomes;
    and only a subset of the class codes are used, sometimes a small subset.
    refs #12490
    
• src/hg/hgTracks/variation.c
  • lines changed 2, context: html, text, full: html, text
    In snp125+ track controls, don't show options for class and validationcodes that don't appear in the table. For example, validation codes
    by-hapmap and by-1000genomes are not applicable for non-human genomes;
    and only a subset of the class codes are used, sometimes a small subset.
    refs #12490
    
• src/hg/hgc/hgc.c
  • lines changed 7, context: html, text, full: html, text
    Use a little more smarts in looking for snpNNNSeq.fa file so it's notalways necessary to add snpSeqFile settings for snpNNN{Common,Mult,Flagged} tracks.
    refs #12490
    
• src/hg/inc/snp125Ui.h
  • lines changed 2, context: html, text, full: html, text
    In snp125+ track controls, don't show options for class and validationcodes that don't appear in the table. For example, validation codes
    by-hapmap and by-1000genomes are not applicable for non-human genomes;
    and only a subset of the class codes are used, sometimes a small subset.
    refs #12490
    
• src/hg/lib/snp125Ui.c
  • lines changed 4, context: html, text, full: html, text
    In snp125+ track controls, don't show options for class and validationcodes that don't appear in the table. For example, validation codes
    by-hapmap and by-1000genomes are not applicable for non-human genomes;
    and only a subset of the class codes are used, sometimes a small subset.
    refs #12490
    
• src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra
  • lines changed 6, context: html, text, full: html, text
    Adding a missing setting for mm10.snp138{Mult,Common}. refs #12490