Commits for hiram

v298_base to v299_preview (2014-04-07 to 2014-04-14) v299

• must also specify release alpha in the sub-track of a super track alpha release refs #12803
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.ra - lines changed 1, context: html, text, full: html, text
• adding criGri1 Chinese hamster refs #6506
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 19, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/lib/gbGenome.c - lines changed 2, context: html, text, full: html, text
• adding serCan1 cynSem1 refs #10272
  • src/hg/utils/phyloTrees/122way.commonNames.nh - lines changed 122, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/122way.scientificNames.nh - lines changed 122, context: html, text, full: html, text
• adding serCan1 cynSem1 refs #10272
  • src/hg/utils/phyloTrees/120way.scientificNames.nh - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/commonNames.sh - lines changed 2, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/dbCommonScientificCladeOrderkey.tab - lines changed 10, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/makefile - lines changed 7, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/scientificNames.sh - lines changed 2, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/vertebrates.txt - lines changed 12, context: html, text, full: html, text
• adding Japanese eel angJap1 refs @10272
  • src/hg/utils/phyloTrees/123way.commonNames.nh - lines changed 123, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/123way.nh - lines changed 123, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/123way.scientificNames.nh - lines changed 123, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/commonNames.sh - lines changed 2, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/makefile - lines changed 7, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/scientificNames.sh - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/vertebrates.txt - lines changed 3, context: html, text, full: html, text
• adding serCan1 cynSem1 refs #10272
  • src/hg/utils/phyloTrees/122way.nh - lines changed 122, context: html, text, full: html, text
• adding angJap1 Japanese eel Anguilla japonica refs #10272
  • src/hg/utils/phyloTrees/dbCommonScientificCladeOrderkey.tab - lines changed 1, context: html, text, full: html, text
• adding genomes to catch up with NCBI FTP site
  • src/hg/utils/phyloTrees/120way.commonNames.nh - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/120way.scientificNames.nh - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/122way.commonNames.nh - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/122way.scientificNames.nh - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/123way.commonNames.nh - lines changed 4, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/123way.scientificNames.nh - lines changed 4, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/129way.commonNames.nh - lines changed 129, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/129way.nh - lines changed 129, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/129way.scientificNames.nh - lines changed 129, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/commonNames.sh - lines changed 8, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/dbCommonScientificCladeOrderkey.tab - lines changed 7, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/makefile - lines changed 7, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/placentals.txt - lines changed 8, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/scientificNames.sh - lines changed 9, context: html, text, full: html, text
  • src/hg/utils/phyloTrees/vertebrates.txt - lines changed 18, context: html, text, full: html, text
• moving chrPic2 up one refs #10272
  • src/hg/utils/phyloTrees/dbCommonScientificCladeOrderkey.tab - lines changed 2, context: html, text, full: html, text
• adding rules for criGri1 refs #6506
  • src/hg/makeDb/schema/all.joiner - lines changed 15, context: html, text, full: html, text
• Added criGri1 to daily hgwdev build refs #6506
  • src/hg/makeDb/genbank/etc/align.dbs - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/genbank/etc/hgwdev.dbs - lines changed 1, context: html, text, full: html, text
• in the pushQ 007215 refs #6506
  • src/hg/makeDb/doc/criGri1.txt - lines changed 415, context: html, text, full: html, text
• in the pushQ 007216 refs #9419
  • src/hg/makeDb/doc/eriEur2.txt - lines changed 1704, context: html, text, full: html, text
• adding rmskUpdate track for refs #12522 investigation
  • src/hg/makeDb/trackDb/trackDb.ra - lines changed 18, context: html, text, full: html, text
• v299 preview1 refs #13064
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text