File Changes for kent

v301_base to v302_preview (2014-06-09 to 2014-06-16) v302

• src/hg/encode3/encodeDataWarehouse/edwMakeEnrichments/edwMakeEnrichments.c
  • lines changed 1, context: html, text, full: html, text
    Doing enrichment calcs straight up bigBed types.
• src/hg/encode3/encodeDataWarehouse/edwMakeReplicateQa/edwMakeReplicateQa.c
  • lines changed 55, context: html, text, full: html, text
    Adding 'bed_' type formats.
• src/hg/encode3/encodeDataWarehouse/edwUndeprecate/edwUndeprecate.c
  • lines changed 57, context: html, text, full: html, text
    Your basic command line undeprecator.
• src/hg/encode3/encodeDataWarehouse/utils/edwSolexaToSangerFastq/edwSolexaToSangerFastq.c
  • lines changed 4, context: html, text, full: html, text
    Fixing signedness.
• src/hg/oneShot/freen/freen.c
  • lines changed 37, context: html, text, full: html, text
    Freen finds a lineFileSeek bug.
  • lines changed 28, context: html, text, full: html, text
    Demoing autoSql
• src/lib/fq.c
  • lines changed 1, context: html, text, full: html, text
    Fixing signedness warning/error
• src/lib/linefile.c
  • lines changed 8, context: html, text, full: html, text
    Removing an optimization for short seeks in lineFileSeek that was breaking in most cases.