File Changes for max

v307_preview to v307_preview2 (2014-09-29 to 2014-10-06) v307

• src/browserbox/README.txt
  • lines changed 7, context: html, text, full: html, text
    gbib update to ubuntu 14 , refs #11957
  • lines changed 10, context: html, text, full: html, text
    gbib admin readme update
• src/browserbox/etc/apache2/sites-available/001-browser.conf
  • lines changed 41, context: html, text, full: html, text
    gbib update to ubuntu 14 , refs #11957
• src/browserbox/packages-ubuntu13.txt
  • lines changed 394, context: html, text, full: html, text
    gbib update to ubuntu 14 , refs #11957
• src/browserbox/packages-ubuntu14.txt
  • lines changed 451, context: html, text, full: html, text
    gbib update to ubuntu 14 , refs #11957
• src/browserbox/packages.txt
  • lines changed 394, context: html, text, full: html, text
    gbib admin readme update
• src/browserbox/root/updateBrowser.sh
  • lines changed 175, context: html, text, full: html, text
    gbib update to ubuntu 14 , refs #11957
• src/hg/hgLogin/hgLogin.c
  • lines changed 2, context: html, text, full: html, text
    fixing a memory error that become apparent only on the new gbib, refs #14067 note 86
• src/hg/hgTables/identifiers.c
  • lines changed 5, context: html, text, full: html, text
    deactivate sample identifiers on gbib, cannot use hgTemp database, refs #14067
• src/hg/lib/fileUi.c
  • lines changed 15, context: html, text, full: html, text
    fixing gbib bug due to rsync 3.1, refs #14091
• src/hg/lib/hdb.c
  • lines changed 1, context: html, text, full: html, text
    fixing gbib error on assembly hubs, refs #11957
• src/hg/lib/jksql.c
  • lines changed 1, context: html, text, full: html, text
    fixing null pointer error that occurs in gbib using angie's suggested code changes in refs #14067, note 58, refs #11957
• src/hg/makeDb/trackDb/ebola/eboVir2/trackDb.netMhcPanII.ra
  • lines changed 403, context: html, text, full: html, text
    adding more netMhc prediction tracks
• src/hg/makeDb/trackDb/ebola/eboVir2/trackDb.ra
  • lines changed 7, context: html, text, full: html, text
    reactivating the iedb predictions, as table should be dropped ongenome-preview by now, so should only be live on hgwdev
    
  • lines changed 1, context: html, text, full: html, text
    adding more netMhc prediction tracks
• src/hg/makeDb/trackDb/tagTypes.tab
  • lines changed 2, context: html, text, full: html, text
    scoreMin does work with bigBed, must have been forgotten in tagTypes.tab
• src/inc/common.mk
  • lines changed 5, context: html, text, full: html, text
    adding a makefile flag COREDUMP=1 to make the CGIs create coredumps instead of showing errors
• src/lib/annoAssembly.c
  • lines changed 2, context: html, text, full: html, text
    taking back commit bd1c185f86d1b6cd77570bc5583c87ad27c791ba
• src/lib/common.c
  • lines changed 1, context: html, text, full: html, text
    fixing null pointer error that occurs in gbib using angie's suggested code changes in refs #14067, note 58, refs #11957
• src/lib/errAbort.c
  • lines changed 3, context: html, text, full: html, text
    adding a makefile flag COREDUMP=1 to make the CGIs create coredumps instead of showing errors