File Changes for hiram

v309_preview2 to v309_base (2014-11-17 to 2014-11-24) v309

• src/hg/inc/versionInfo.h
  • lines changed 1, context: html, text, full: html, text
    New version number v309
• src/hg/makeDb/doc/dm6.txt
  • lines changed 187, context: html, text, full: html, text
    added phyloP and phastCons to 27-way refs #4049
• src/hg/makeDb/doc/eboVir3/newSequences.txt
  • lines changed 147, context: html, text, full: html, text
    new sequence procedure under construction refs #14278
• src/hg/makeDb/genbank/etc/align.dbs
  • lines changed 1, context: html, text, full: html, text
    Added dm6 refs #4049
• src/hg/makeDb/genbank/etc/genbank.conf
  • lines changed 2, context: html, text, full: html, text
    dm6 GeneTbl upstreamMaf set to 27-way refs #4049
• src/hg/makeDb/genbank/etc/hgwdev.dbs
  • lines changed 1, context: html, text, full: html, text
    Added dm6 refs #4049
• src/hg/makeDb/trackDb/cat/felCat8/description.html
  • lines changed 63, context: html, text, full: html, text
    adding felCat8 to the build refs #14412
• src/hg/makeDb/trackDb/cat/felCat8/gap.html
  • lines changed 32, context: html, text, full: html, text
    adding felCat8 to the build refs #14412
• src/hg/makeDb/trackDb/cat/felCat8/gold.html
  • lines changed 34, context: html, text, full: html, text
    adding felCat8 to the build refs #14412
• src/hg/makeDb/trackDb/cat/felCat8/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    adding felCat8 to the build refs #14412
• src/hg/makeDb/trackDb/drosophila/dm6/cons27way.html
  • lines changed 411, context: html, text, full: html, text
    descr page for 27-way refs #4049
  • lines changed 2, context: html, text, full: html, text
    correct reference to 27 refs #4049
• src/hg/makeDb/trackDb/drosophila/dm6/flyBaseGene.ra
  • lines changed 2, context: html, text, full: html, text
    turning on phastCons phyloP and reset default viz refs #4049
• src/hg/makeDb/trackDb/drosophila/dm6/trackDb.27way.ra
  • lines changed 68, context: html, text, full: html, text
    turning on phastCons phyloP and reset default viz refs #4049
• src/hg/makeDb/trackDb/drosophila/dm6/trackDb.ra
  • lines changed 4, context: html, text, full: html, text
    turning on phastCons phyloP and reset default viz refs #4049
• src/hg/makeDb/trackDb/ebola/eboVir3/trackDb.newSequences.ra
  • lines changed 74, context: html, text, full: html, text
    adding four new sequences refs #14278
  • lines changed 2, context: html, text, full: html, text
    using correct Snp table refs #14278
• src/hg/makeDb/trackDb/makefile
  • lines changed 1, context: html, text, full: html, text
    adding tarSyr2 to the build refs #14410
  • lines changed 1, context: html, text, full: html, text
    adding felCat8 to the build refs #14412
• src/hg/makeDb/trackDb/tarsier/tarSyr2/description.html
  • lines changed 63, context: html, text, full: html, text
    initial files from makeGenomeDb refs #14410
• src/hg/makeDb/trackDb/tarsier/tarSyr2/gap.html
  • lines changed 30, context: html, text, full: html, text
    initial files from makeGenomeDb refs #14410
• src/hg/makeDb/trackDb/tarsier/tarSyr2/gold.html
  • lines changed 34, context: html, text, full: html, text
    initial files from makeGenomeDb refs #14410
• src/hg/makeDb/trackDb/tarsier/tarSyr2/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    initial files from makeGenomeDb refs #14410
• src/hg/utils/automation/makeGenomeDb.pl
  • lines changed 2, context: html, text, full: html, text
    new includes for top level trackDb for joinedRmsk refs #14410
• src/utils/qa/weeklybld/buildEnv.csh
  • lines changed 3, context: html, text, full: html, text
    v309 final build refs #14342