File Changes for kate

v311_preview2 to v311_base (2015-01-20 to 2015-01-26) v311

• src/hg/encode3/cellsFromEncode3.py
  • lines changed 62, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
• src/hg/hgTracks/hgTracks.c
  • lines changed 8, context: html, text, full: html, text
    Use composite color for dense mode center label (instead of first track
• src/hg/hgTracks/multiWig.c
  • lines changed 2, context: html, text, full: html, text
    force black labels on unaggregated full multiwigs (JK request)
• src/hg/hgTracks/wigTrack.c
  • lines changed 4, context: html, text, full: html, text
    Make wigLeftLbels respect color param. Needed to force black labels on unaggregated full multiwigs (JK request)
• src/hg/hgc/peakClusters.c
  • lines changed 51, context: html, text, full: html, text
    Merge duplicated code. refs #14353
  • lines changed 64, context: html, text, full: html, text
    Add inputFieldMetaTables setting to trackDb. It provides a way to add meta tables to non-composites (same functionality as subGroupMetaTables setting). Used in details of DNase clusters, to replace cv.ra and metaDb. refs #14353
  • lines changed 10, context: html, text, full: html, text
    Add link to table browser view of table in 'more info' section of clutser details (as we have no metadata link). refs #14353
• src/hg/inc/encode/wgEncodeCell.h
  • lines changed 2, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
• src/hg/inc/hui.h
  • lines changed 10, context: html, text, full: html, text
    Add inputFieldMetaTables setting to trackDb. It provides a way to add meta tables to non-composites (same functionality as subGroupMetaTables setting). Used in details of DNase clusters, to replace cv.ra and metaDb. refs #14353
• src/hg/js/utils.js
  • lines changed 16, context: html, text, full: html, text
    Fix table sort bug (wasn't doing subsorts on columns other than the clicked one). refs #14723
• src/hg/lib/encode/wgEncodeCell.as
  • lines changed 1, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
• src/hg/lib/encode/wgEncodeCell.c
  • lines changed 18, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
• src/hg/lib/encode/wgEncodeCell.sql
  • lines changed 1, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
• src/hg/lib/hui.c
  • lines changed 86, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
  • lines changed 47, context: html, text, full: html, text
    Add inputFieldMetaTables setting to trackDb. It provides a way to add meta tables to non-composites (same functionality as subGroupMetaTables setting). Used in details of DNase clusters, to replace cv.ra and metaDb. refs #14353
  • lines changed 1, context: html, text, full: html, text
    Fix typo caught by alert Angie during review.
• src/hg/lib/web.c
  • lines changed 1, context: html, text, full: html, text
    Use color constant (one step toward using style)
• src/hg/makeDb/doc/hg38/reg.txt
  • lines changed 6, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
  • lines changed 19, context: html, text, full: html, text
    Add link to table browser view of table in 'more info' section of clutser details (as we have no metadata link). refs #14353
• src/hg/makeDb/trackDb/human/hg38/uwDnase.ra
  • lines changed 1, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
  • lines changed 5, context: html, text, full: html, text
    Add inputFieldMetaTables setting to trackDb. It provides a way to add meta tables to non-composites (same functionality as subGroupMetaTables setting). Used in details of DNase clusters, to replace cv.ra and metaDb. refs #14353
  • lines changed 191, context: html, text, full: html, text
    Add link to table browser view of table in 'more info' section of clutser details (as we have no metadata link). refs #14353
• src/hg/makeDb/trackDb/tagTypes.tab
  • lines changed 1, context: html, text, full: html, text
    Add 'subGroupMetaTables' setting to trackDb. This setting allows specification of a metadata table (minimally description+url) describing terms in a subgroup (e.g. hgFixed.wgEncodeCell for the 'cellType' subgroup in ENCODE tracks. This ia aimed at providing basic metadata functionality with lower overhead than the cv.ra + metaDb table used during ENCODE2. refs #14353
  • lines changed 1, context: html, text, full: html, text
    Add inputFieldMetaTables setting to trackDb. It provides a way to add meta tables to non-composites (same functionality as subGroupMetaTables setting). Used in details of DNase clusters, to replace cv.ra and metaDb. refs #14353