File Changes for angie

v315_preview to v315_preview2 (2015-04-08 to 2015-04-13) v315

• src/hg/hgGenome/import.c
  • lines changed 9, context: html, text, full: html, text
    Libifying trackDbCmpShortLabel so I can use it elsewhere.
    
• src/hg/hgTables/bigBed.c
  • lines changed 1, context: html, text, full: html, text
    Better to use hTableExists() as Max pointed out. refs #15126
    
• src/hg/hgTables/correlate.c
  • lines changed 1, context: html, text, full: html, text
    Libifying trackDbCmpShortLabel so I can use it elsewhere.
    
• src/hg/hgTables/hgTables.h
  • lines changed 3, context: html, text, full: html, text
    Libifying trackDbCmpShortLabel so I can use it elsewhere.
    
• src/hg/hgTables/mainPage.c
  • lines changed 9, context: html, text, full: html, text
    Libifying trackDbCmpShortLabel so I can use it elsewhere.
    
• src/hg/hgVarAnnogrator/hgVarAnnogrator.c
  • lines changed 8, context: html, text, full: html, text
    Libifying trackDbCmpShortLabel so I can use it elsewhere.
    
• src/hg/inc/trackDb.h
  • lines changed 3, context: html, text, full: html, text
    Libifying trackDbCmpShortLabel so I can use it elsewhere.
    
• src/hg/js/model/hgIntegrator/hgIntegratorModel.js
  • lines changed 10, context: html, text, full: html, text
    Handle empty groupedTrackDb more gracefully.
    
• src/hg/js/model/lib/ImModel.js
  • lines changed 2, context: html, text, full: html, text
    Oops, the actual error message from the CGI was not displayed as intended -- fixed. refs #14579 note 31
    
  • lines changed 23, context: html, text, full: html, text
    ImModel: support custom server error handler in cartDo.
    PositionSearch: if server's error message is only the benign "Sorry,
    couldn't find <blah> in genome", just display it to the user instead
    of treating it as a real error from the server.
    refs #14579
    
• src/hg/js/model/lib/PositionSearchMixin.js
  • lines changed 11, context: html, text, full: html, text
    ImModel: support custom server error handler in cartDo.
    PositionSearch: if server's error message is only the benign "Sorry,
    couldn't find <blah> in genome", just display it to the user instead
    of treating it as a real error from the server.
    refs #14579
    
• src/hg/lib/cartJson.c
  • lines changed 53, context: html, text, full: html, text
    Matt found that an assembly hub with no track groups (e.g. ThorntonHub)
    caused errors in hgIntegrator. Detect that case and make an "All Tracks"
    group if there are no other groups. refs #14579 note 32
    
• src/hg/lib/hAnno.c
  • lines changed 3, context: html, text, full: html, text
    Better to use hTableExists() as Max pointed out. refs #15126
    
• src/hg/lib/trackDbCustom.c
  • lines changed 8, context: html, text, full: html, text
    Libifying trackDbCmpShortLabel so I can use it elsewhere.
    
• src/hg/lib/trackHub.c
  • lines changed 1, context: html, text, full: html, text
    Include defaultPos in dbDb from trackHub::makeDbDbFromAssemblyGenome (so cartJson can find it in dbDbs from trackHubGetDbDbs). refs #14579 note 30