File Changes for angie

v319_preview2 to v319_base (2015-07-06 to 2015-07-13) v319

• src/hg/js/model/hgIntegrator/hgIntegratorModel.js
  • lines changed 22, context: html, text, full: html, text
    When making schema links to the table browser, be careful to differentiate
    between track and table name because every once in a while they differ.
    refs #15676
    
• src/hg/js/model/lib/CladeOrgDbMixin.js
  • lines changed 12, context: html, text, full: html, text
    Separate processing of related cart vars in a nondeterministic order
    was wreaking havoc with clade/org/db menus for non-default dbs.
    For now, wrap those cart vars together so that they are processed
    correctly.
    
    It would be better still to make registerCartVarHandler reject lists
    of variables; one variable, one handler function. If that proves
    inconvenient, then we could bind lists of variables to a single
    handler function.
    
    refs #15681
    
• src/hg/js/model/lib/cart.js
  • lines changed 5, context: html, text, full: html, text
    Exit out of ajax error handler if it looks like the error is due to the
    user navigating away from the page.
    refs #15533
    
• src/hg/lib/cartJson.c
  • lines changed 2, context: html, text, full: html, text
    Separate processing of related cart vars in a nondeterministic order
    was wreaking havoc with clade/org/db menus for non-default dbs.
    For now, wrap those cart vars together so that they are processed
    correctly.
    
    It would be better still to make registerCartVarHandler reject lists
    of variables; one variable, one handler function. If that proves
    inconvenient, then we could bind lists of variables to a single
    handler function.
    
    refs #15681
    
• src/lib/annoFormatTab.c
  • lines changed 16, context: html, text, full: html, text
    When averaging wig values, skip over NAN values so that they don't
    cause the sum and average to be NAN. If all values in range are NAN,
    just return NULL words so that nothing is output -- there are no valid
    overlapping values.
    refs #15675