Commits for angie

v319_preview2 to v319_base (2015-07-06 to 2015-07-13) v319

• When averaging wig values, skip over NAN values so that they don't
  cause the sum and average to be NAN. If all values in range are NAN,
  just return NULL words so that nothing is output -- there are no valid
  overlapping values.
  refs #15675
  
  • src/lib/annoFormatTab.c - lines changed 16, context: html, text, full: html, text
• Separate processing of related cart vars in a nondeterministic order
  was wreaking havoc with clade/org/db menus for non-default dbs.
  For now, wrap those cart vars together so that they are processed
  correctly.
  
  It would be better still to make registerCartVarHandler reject lists
  of variables; one variable, one handler function. If that proves
  inconvenient, then we could bind lists of variables to a single
  handler function.
  
  refs #15681
  
  • src/hg/js/model/lib/CladeOrgDbMixin.js - lines changed 12, context: html, text, full: html, text
  • src/hg/lib/cartJson.c - lines changed 2, context: html, text, full: html, text
• When making schema links to the table browser, be careful to differentiate
  between track and table name because every once in a while they differ.
  refs #15676
  
  • src/hg/js/model/hgIntegrator/hgIntegratorModel.js - lines changed 22, context: html, text, full: html, text
• Exit out of ajax error handler if it looks like the error is due to the
  user navigating away from the page.
  refs #15533
  
  • src/hg/js/model/lib/cart.js - lines changed 5, context: html, text, full: html, text