File Changes for max

v323_base to v324_preview (2015-10-05 to 2015-10-12) v324

• src/browserbox/root/updateBrowser.sh
  • lines changed 3, context: html, text, full: html, text
    tolerate non-virtualbox VMs better in gbib, refs #16186
    
• src/hg/cirm/cdw/utils/cdwVcfStats/tests/expected.out
  • lines changed 15, context: html, text, full: html, text
    adding a test for cdwVcfStats
    
• src/hg/cirm/cdw/utils/cdwVcfStats/tests/indelTrim.vcf
  • lines changed 17, context: html, text, full: html, text
    adding a test for cdwVcfStats
    
• src/hg/cirm/cdw/utils/cdwVcfStats/tests/makefile
  • lines changed 4, context: html, text, full: html, text
    adding a test for cdwVcfStats
    
• src/hg/hgLogin/hgLogin.c
  • lines changed 16, context: html, text, full: html, text
    trying to make hgLogin work as a non-root htdocs, refs #16187
    
• src/hg/hgMirror/hgMirror
  • lines changed 40, context: html, text, full: html, text
    use cookie to save last db in hgMirror, refs #16185.
    Also remove the workaround in makefile for hgwdev as it's not needed
    anymore.
    
• src/hg/hgMirror/makefile
  • lines changed 2, context: html, text, full: html, text
    use cookie to save last db in hgMirror, refs #16185.
    Also remove the workaround in makefile for hgwdev as it's not needed
    anymore.
    
• src/hg/hgTables/hgTables.c
  • lines changed 10, context: html, text, full: html, text
    handle table names that include the database
    
• src/hg/htdocs/goldenPath/help/customTrackText.html
  • lines changed 1, context: html, text, full: html, text
    fixing link after code review, refs #16106, refs #16145
    
• src/hg/makeDb/trackDb/other/repeats2/trackDb.project.ra
  • lines changed 392, context: html, text, full: html, text
    update to repeats2
    
• src/hg/makeDb/trackDb/other/repeats2/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    update to repeats2
    
• src/inc/cheapcgi.h
  • lines changed 6, context: html, text, full: html, text
    trying to make hgLogin work as a non-root htdocs, refs #16187
    
• src/lib/cheapcgi.c
  • lines changed 17, context: html, text, full: html, text
    trying to make hgLogin work as a non-root htdocs, refs #16187
    
• src/tagStorm/jsonToTagStorm/errCheck.sh
  • lines changed 41, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/jsonToTagStorm/tests/errCheck.sh
  • lines changed 6, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/jsonToTagStorm/tests/makefile
  • lines changed 2, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/makefile
  • lines changed 24, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormDeleteTags/tests/makefile
  • lines changed 1, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormDeleteTags/tests/output/out.tags
  • lines changed 53, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormInfo/test.in
  • lines changed 146, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormInfo/tests/expected.out
  • lines changed 5, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormInfo/tests/makefile
  • lines changed 10, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormInfo/tests/test.in
  • lines changed 146, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormJoinTab/test.tab
  • lines changed 155, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormJoinTab/test.tags
  • lines changed 122, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormJoinTab/tests/expected.out
  • lines changed 942, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormJoinTab/tests/makefile
  • lines changed 10, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormJoinTab/tests/test.out
  • lines changed 942, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormJoinTab/tests/test.tab
  • lines changed 155, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormJoinTab/tests/test.tags
  • lines changed 122, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/expected.files
  • lines changed 25, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/expected.ra
  • lines changed 494, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/expected.tab
  • lines changed 35, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/makefile
  • lines changed 11, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/test.in
  • lines changed 146, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/tests/expected.files
  • lines changed 25, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/tests/expected.ra
  • lines changed 494, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/tests/expected.tab
  • lines changed 35, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/tests/makefile
  • lines changed 14, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormReformat/tests/test.in
  • lines changed 146, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormToJson/tests/expected.out
  • lines changed 1, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormToJson/tests/makefile
  • lines changed 7, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile
    
• src/tagStorm/tagStormToJson/tests/test.tags
  • lines changed 12, context: html, text, full: html, text
    cleaning up the tagstorm a little bit and adding the tools to the main
    makefile