Commits for max
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v323_base to v324_preview (2015-10-05 to 2015-10-12) v324
- fixing link after code review, refs #16106, refs #16145
- src/hg/htdocs/goldenPath/help/customTrackText.html - lines changed 1, context: html, text, full: html, text
- update to repeats2
- src/hg/makeDb/trackDb/other/repeats2/trackDb.project.ra - lines changed 392, context: html, text, full: html, text
- src/hg/makeDb/trackDb/other/repeats2/trackDb.ra - lines changed 1, context: html, text, full: html, text
- cleaning up the tagstorm a little bit and adding the tools to the main
makefile
- src/tagStorm/jsonToTagStorm/errCheck.sh - lines changed 41, context: html, text, full: html, text
- src/tagStorm/jsonToTagStorm/tests/errCheck.sh - lines changed 6, context: html, text, full: html, text
- src/tagStorm/jsonToTagStorm/tests/makefile - lines changed 2, context: html, text, full: html, text
- src/tagStorm/tagStormDeleteTags/tests/makefile - lines changed 1, context: html, text, full: html, text
- src/tagStorm/tagStormDeleteTags/tests/output/out.tags - lines changed 53, context: html, text, full: html, text
- src/tagStorm/tagStormInfo/test.in - lines changed 146, context: html, text, full: html, text
- src/tagStorm/tagStormInfo/tests/expected.out - lines changed 5, context: html, text, full: html, text
- src/tagStorm/tagStormInfo/tests/makefile - lines changed 10, context: html, text, full: html, text
- src/tagStorm/tagStormInfo/tests/test.in - lines changed 146, context: html, text, full: html, text
- src/tagStorm/tagStormJoinTab/test.tab - lines changed 155, context: html, text, full: html, text
- src/tagStorm/tagStormJoinTab/test.tags - lines changed 122, context: html, text, full: html, text
- src/tagStorm/tagStormJoinTab/tests/expected.out - lines changed 942, context: html, text, full: html, text
- src/tagStorm/tagStormJoinTab/tests/makefile - lines changed 10, context: html, text, full: html, text
- src/tagStorm/tagStormJoinTab/tests/test.out - lines changed 942, context: html, text, full: html, text
- src/tagStorm/tagStormJoinTab/tests/test.tab - lines changed 155, context: html, text, full: html, text
- src/tagStorm/tagStormJoinTab/tests/test.tags - lines changed 122, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/expected.files - lines changed 25, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/expected.ra - lines changed 494, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/expected.tab - lines changed 35, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/makefile - lines changed 11, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/test.in - lines changed 146, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/tests/expected.files - lines changed 25, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/tests/expected.ra - lines changed 494, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/tests/expected.tab - lines changed 35, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/tests/makefile - lines changed 14, context: html, text, full: html, text
- src/tagStorm/tagStormReformat/tests/test.in - lines changed 146, context: html, text, full: html, text
- src/tagStorm/tagStormToJson/tests/expected.out - lines changed 1, context: html, text, full: html, text
- src/tagStorm/tagStormToJson/tests/makefile - lines changed 7, context: html, text, full: html, text
- src/tagStorm/tagStormToJson/tests/test.tags - lines changed 12, context: html, text, full: html, text
- adding a test for cdwVcfStats
- src/hg/cirm/cdw/utils/cdwVcfStats/tests/expected.out - lines changed 15, context: html, text, full: html, text
- src/hg/cirm/cdw/utils/cdwVcfStats/tests/indelTrim.vcf - lines changed 17, context: html, text, full: html, text
- src/hg/cirm/cdw/utils/cdwVcfStats/tests/makefile - lines changed 4, context: html, text, full: html, text
- use cookie to save last db in hgMirror, refs #16185.
Also remove the workaround in makefile for hgwdev as it's not needed
anymore.
- src/hg/hgMirror/hgMirror - lines changed 40, context: html, text, full: html, text
- src/hg/hgMirror/makefile - lines changed 2, context: html, text, full: html, text
- tolerate non-virtualbox VMs better in gbib, refs #16186
- src/browserbox/root/updateBrowser.sh - lines changed 3, context: html, text, full: html, text
- trying to make hgLogin work as a non-root htdocs, refs #16187
- src/hg/hgLogin/hgLogin.c - lines changed 16, context: html, text, full: html, text
- handle table names that include the database
- src/hg/hgTables/hgTables.c - lines changed 10, context: html, text, full: html, text
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