File Changes for kent

v342_base to v343_preview (2016-12-05 to 2016-12-19) v343

• src/hg/cirm/cdw/cdwChangeAccess/cdwChangeAccess.c
  • lines changed 16, context: html, text, full: html, text
    b8ad24053540b0671424d324770e314a408b4bac Wed Dec 7 12:31:35 2016 -0800
    Adding -id option.
• src/hg/cirm/cdw/cdwGroupFile/cdwGroupFile.c
  • lines changed 21, context: html, text, full: html, text
    ec0f405c412524b4db6ca1363285b7195f571261 Wed Dec 7 12:32:06 2016 -0800
    Adding -id option.
  • lines changed 1, context: html, text, full: html, text
    7953d348a47ca2566d13b9decfe3cf510af971b1 Mon Dec 12 15:14:47 2016 -0800
    oops, vf->id should have been vf->fileId!
• src/hg/cirm/cdw/cdwSubmit/cdwSubmit.c
  • lines changed 43, context: html, text, full: html, text
    171885f8c06eea0da831433ddafc194712798449 Wed Dec 7 12:28:30 2016 -0800
    Making meta.txt and manifest.txt get their file permissions and groups set.
• src/hg/cirm/cdw/cdwWebBrowse/cdwWebBrowse.c
  • lines changed 5, context: html, text, full: html, text
    080f3b1ad5610d709b20dad37ada05da41d23700 Tue Dec 6 17:57:52 2016 -0800
    Removing an unused parameter, and adding datasetId to label on dataset page list.
• src/hg/cirm/cdw/cdwWebBrowse/version.doc
  • lines changed 6, context: html, text, full: html, text
    a7cca5a01f084ce82e1bc73009fde0c5601d6814 Wed Dec 7 12:30:57 2016 -0800
    Decribing recent changes.
• src/hg/cirm/cdw/lib/cdwValid.c
  • lines changed 15, context: html, text, full: html, text
    aee231ceb577134cf8df8af1a5385be3629cd248 Wed Dec 14 18:54:27 2016 -0800
    Adding subcellular_localization tag and controlled vocab.
• src/hg/cirm/cdw/oneShot/cdwFixFrazer3/cdwFixFrazer3.c
  • lines changed 127, context: html, text, full: html, text
    0cf014f5ff559c705ef8dd96cca5e637e02ef305 Wed Dec 14 18:50:40 2016 -0800
    A program to massage Frazer metadata tree by moving solo meta stanzas up and adding a sample_label tag.
• src/hg/cirm/cdw/oneShot/cdwFixFrazer3/makefile
  • lines changed 3, context: html, text, full: html, text
    0cf014f5ff559c705ef8dd96cca5e637e02ef305 Wed Dec 14 18:50:40 2016 -0800
    A program to massage Frazer metadata tree by moving solo meta stanzas up and adding a sample_label tag.
• src/hg/cirm/cdw/oneShot/cdwFixFrazerControls2/cdwFixFrazerControls2.c
  • lines changed 106, context: html, text, full: html, text
    009bf8a5c3cd3a699fdcd236119ad69e1924dd8e Wed Dec 14 12:16:07 2016 -0800
    A little program to fix some issues with the ChIP-seq controls and assays tags in the second Frazer lab submission.
• src/hg/cirm/cdw/oneShot/cdwFixFrazerControls2/makefile
  • lines changed 3, context: html, text, full: html, text
    009bf8a5c3cd3a699fdcd236119ad69e1924dd8e Wed Dec 14 12:16:07 2016 -0800
    A little program to fix some issues with the ChIP-seq controls and assays tags in the second Frazer lab submission.
• src/hg/oneShot/freen/freen.c
  • lines changed 9, context: html, text, full: html, text
    a1ee3cb0f0574ac88b3e35681706d61fff5f3b75 Wed Dec 7 12:32:52 2016 -0800
    Checking error messages we get from overloading library function names.
• src/inc/tagStorm.h
  • lines changed 16, context: html, text, full: html, text
    749dadba2cba56c5cc7b64425048093cee380713 Wed Dec 14 18:52:16 2016 -0800
    Renaming tagStormUpdateTag to tagStanzaUpdateTag for consistency, and adding a new tagStanzaDeleteTag.
• src/lib/tagStorm.c
  • lines changed 26, context: html, text, full: html, text
    749dadba2cba56c5cc7b64425048093cee380713 Wed Dec 14 18:52:16 2016 -0800
    Renaming tagStormUpdateTag to tagStanzaUpdateTag for consistency, and adding a new tagStanzaDeleteTag.
• src/tagStorm/tagStormHoist/tagStormHoist.c
  • lines changed 1, context: html, text, full: html, text
    749dadba2cba56c5cc7b64425048093cee380713 Wed Dec 14 18:52:16 2016 -0800
    Renaming tagStormUpdateTag to tagStanzaUpdateTag for consistency, and adding a new tagStanzaDeleteTag.
  • lines changed 10, context: html, text, full: html, text
    fc1eaa85ad365f4e1eb76372da4189b3b038ddf2 Thu Dec 15 08:01:52 2016 -0800
    Added -one option to hoist just a single tag.
• src/tagStorm/tagStormToHtml/tagStormToHtml.c
  • lines changed 12, context: html, text, full: html, text
    530f3e6a088dee15b6ef77d89ab7ea9f8bb70245 Tue Dec 6 17:56:11 2016 -0800
    Simplifying look and reducing number of DOM objects.
  • lines changed 5, context: html, text, full: html, text
    f41fc48aa625075782b67ef8e41f4538aeedae2f Fri Dec 9 09:25:35 2016 -0800
    Put in code to check for IE, and put up simpler non-javascript page if that is the case. Removed tabs since they are interpreted as 4 spaces not 8 under web browsers javascript debuggers, and so code looks off.