File Changes for kent

v343_preview to v343_preview2 (2016-12-19 to 2017-01-03) v343

• src/hg/cirm/cdw/cdwMakeFileTags/cdwMakeFileTags.c
  • lines changed 190, context: html, text, full: html, text
    63a86151d3aeeedebf5b303118f526720e8d39f6 Mon Dec 19 22:15:39 2016 -0800
    Making cdwFileTags table use minimum sized database types.
  • lines changed 11, context: html, text, full: html, text
    86000a33c9b13f1382c1d8e02388a06d3b81451e Tue Dec 20 11:51:32 2016 -0800
    Adding sqlType to the -types output, and putting min before max.
• src/hg/cirm/cdw/cdwMakeValidFile/cdwMakeValidFile.c
  • lines changed 34, context: html, text, full: html, text
    17325ead43fb0dd51d1adf720f3c982a45e6dc5d Mon Dec 26 12:14:51 2016 -0800
    Checking chromosome sizes match declared assembly for bigBed and bigWig files.
  • lines changed 57, context: html, text, full: html, text
    cb58baca5f7b2918a9f335119f5d679ef09a92c5 Tue Dec 27 12:08:54 2016 -0800
    Checking chromosome/assembly agreement for bam files. Improving commenting and error message on similar check for bigWig/bigBed files.
• src/hg/encode3/encodeDataWarehouse/utils/edwBamStats/edwBamStats.c
  • lines changed 1, context: html, text, full: html, text
    0e468e331193dda588bd7c2151997bbdbd4ef517 Tue Dec 27 12:07:28 2016 -0800
    Removing duplicate include file.
• src/inc/bamFile.h
  • lines changed 14, context: html, text, full: html, text
    29356d0b9520b11bb46d22f5c70b8b1a275b5116 Tue Dec 27 12:06:35 2016 -0800
    Removing bamChromInfo structure and the routines to free it. The routine that made it got deleted a while back for some reason, so I'm just tidying up.
• src/lib/bamFile.c
  • lines changed 26, context: html, text, full: html, text
    29356d0b9520b11bb46d22f5c70b8b1a275b5116 Tue Dec 27 12:06:35 2016 -0800
    Removing bamChromInfo structure and the routines to free it. The routine that made it got deleted a while back for some reason, so I'm just tidying up.
• src/tagStorm/tagStormDeleteTags/tagStormDeleteTags.c
  • lines changed 1, context: html, text, full: html, text
    5333b9029b14fbbfa51362c5092de30b693ef7e3 Thu Dec 15 08:04:35 2016 -0800
    Minor improvement to usage message.
• src/tagStorm/tagStormQuery/tagStormQuery.c
  • lines changed 19, context: html, text, full: html, text
    8d9add6559b88bebf9ce119e14b970ab22a5df1e Tue Dec 20 15:11:21 2016 -0800
    Improving usage message.