File Changes for braney

v364_base to v365_preview (2018-04-16 to 2018-04-23) v365

• src/hg/hgCollection/hgCollection.c
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    5b1c3cb6e7ce60e71edfb9e7237eca2fe7a02910 Wed Apr 18 15:45:25 2018 -0700
    fixed bug #21294 by re-introducing some code that checks to see if a name has already been used before appending some uniqueifying text
• src/hg/makeDb/doc/proteins/180404.txt
  • lines changed 200, context: html, text, full: html, text
    6b764f47d409d5ecd9813e0b3e4289c080167082 Thu Apr 19 20:24:07 2018 -0700
    uniProt and proteins database and utility for mm10 ucsc genes build
• src/hg/makeDb/doc/ucscGenes/hg19.ucscGenes14.csh
  • lines changed 3, context: html, text, full: html, text
    88ad7bb93b6f132899e1cc56ac3f69b124d32e48 Sat Apr 21 09:40:25 2018 -0700
    make a test version of Pfam track without TC filtering
• src/hg/makeDb/doc/ucscGenes/hg38.ucscGenes17.sh
  • lines changed 3, context: html, text, full: html, text
    88ad7bb93b6f132899e1cc56ac3f69b124d32e48 Sat Apr 21 09:40:25 2018 -0700
    make a test version of Pfam track without TC filtering
• src/hg/makeDb/doc/ucscGenes/mm10.ucscGenes17.csh
  • lines changed 213, context: html, text, full: html, text
    9405731914c2e4957961ea4c611986c3c3cb2e77 Sat Apr 21 09:46:46 2018 -0700
    changes for mm10 ucsc genes
• src/hg/makeDb/doc/ucscGenes/mm10.ucscGenes17.csh.00
  • lines changed 1655, context: html, text, full: html, text
    9405731914c2e4957961ea4c611986c3c3cb2e77 Sat Apr 21 09:46:46 2018 -0700
    changes for mm10 ucsc genes
• src/hg/makeDb/doc/uniProt/sp180404.txt
  • lines changed 69, context: html, text, full: html, text
    6b764f47d409d5ecd9813e0b3e4289c080167082 Thu Apr 19 20:24:07 2018 -0700
    uniProt and proteins database and utility for mm10 ucsc genes build
• src/hg/makeDb/genbank/etc/ignore.idx
  • lines changed 111, context: html, text, full: html, text
    79d582d68e04b0b5307a4f96b40e8ca22c20c910 Thu Apr 19 20:31:09 2018 -0700
    more things to ignore in genbank
• src/hg/makeDb/genbank/src/lib/gbGenome.c
  • lines changed 2, context: html, text, full: html, text
    6cf93d53f39124cee683b303555ec71846d99cc1 Sat Apr 21 09:48:42 2018 -0700
    add Angie's test assembly to the genbank proces
• src/hg/makeDb/schema/all.joiner
  • lines changed 7, context: html, text, full: html, text
    333ce7ffd4420b76622e9fff7e06e58fdedd8292 Sat Apr 21 09:47:54 2018 -0700
    all.joiner changes for mm10 ucsc genes
• src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra
  • lines changed 4, context: html, text, full: html, text
    9405731914c2e4957961ea4c611986c3c3cb2e77 Sat Apr 21 09:46:46 2018 -0700
    changes for mm10 ucsc genes
• src/hg/txGene/txGeneAlias/txGeneAlias.c
  • lines changed 2, context: html, text, full: html, text
    9405731914c2e4957961ea4c611986c3c3cb2e77 Sat Apr 21 09:46:46 2018 -0700
    changes for mm10 ucsc genes
• src/hg/txGene/txGeneFromBed/txGeneFromBed.c
  • lines changed 1, context: html, text, full: html, text
    9405731914c2e4957961ea4c611986c3c3cb2e77 Sat Apr 21 09:46:46 2018 -0700
    changes for mm10 ucsc genes
• src/hg/txGene/txGeneXref/txGeneXref.c
  • lines changed 5, context: html, text, full: html, text
    9405731914c2e4957961ea4c611986c3c3cb2e77 Sat Apr 21 09:46:46 2018 -0700
    changes for mm10 ucsc genes
• src/hg/utils/stripPatentIds/makefile
  • lines changed 3, context: html, text, full: html, text
    6b764f47d409d5ecd9813e0b3e4289c080167082 Thu Apr 19 20:24:07 2018 -0700
    uniProt and proteins database and utility for mm10 ucsc genes build
• src/hg/utils/stripPatentIds/stripPatentIds.c
  • lines changed 46, context: html, text, full: html, text
    6b764f47d409d5ecd9813e0b3e4289c080167082 Thu Apr 19 20:24:07 2018 -0700
    uniProt and proteins database and utility for mm10 ucsc genes build