File Changes for hiram

v374_preview2 to v374_base (2018-11-05 to 2018-11-12) v374

• src/hg/inc/versionInfo.h
  • lines changed 1, context: html, text, full: html, text
    94ca49469aa9a2c7eb6d58ce0ca45eaa3289db2c Mon Nov 12 10:02:08 2018 -0800
    New version number v374
• src/hg/makeDb/doc/bosTau9/initialBuild.txt
  • lines changed 993, context: html, text, full: html, text
    abfb32782fdf69479add4c6425693aa6843da1e6 Tue Nov 6 12:00:49 2018 -0800
    beginning bosTau9 refs #22425
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    aeb72ec96ea4bd581db5f9bc2ce68863aadee06b Tue Nov 6 15:44:29 2018 -0800
    running repeat masker refs #22425
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    7c9234b9239a9c8223b7b82ee176fa16fca41b95 Thu Nov 8 13:35:40 2018 -0800
    genbank set up running hg38 mm10 lastz chain net refs #22425
• src/hg/makeDb/doc/hg19.txt
  • lines changed 9, context: html, text, full: html, text
    5c47f34eb9751e62455c711c73952bc90878b34e Sun Nov 11 13:31:13 2018 -0800
    crispr 10K run done on hg19 refs #21987
• src/hg/makeDb/doc/mm10.txt
  • lines changed 76, context: html, text, full: html, text
    e9aebd4215542bcbda89eb0b114d0516488ed945 Thu Nov 8 10:38:41 2018 -0800
    starting mm10 vs. bosTau9 lastz chainNet refs #22425
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    4c34bd001dc210b27e71e8b6075fa22c64286538 Sun Nov 11 13:25:24 2018 -0800
    almost done with bosTau9 lastz chainNet refs #22425
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    75ea5687d7991a8db97bdce360b2887684ecc937 Mon Nov 12 09:15:06 2018 -0800
    done with hg38 lastz chainNet refs #22425
• src/hg/makeDb/genbank/etc/genbank.conf
  • lines changed 22, context: html, text, full: html, text
    9272a6a9b7fe172e30d39dc9a3a4311f629f7220 Fri Nov 9 11:40:14 2018 -0800
    adding bosTau9 refs #22425
• src/hg/makeDb/genbank/etc/hgwdev.dbs
  • lines changed 3, context: html, text, full: html, text
    82f255866510c66e9936acca6bd47e5a6ec8f725 Thu Nov 8 13:32:27 2018 -0800
    adding bosTau9 refs #22425
• src/hg/makeDb/schema/all.joiner
  • lines changed 5, context: html, text, full: html, text
    f67ecd77604d1cbf071bb1e598efb9d634652ce7 Thu Nov 8 11:16:41 2018 -0800
    adding mm10 strains1 ext and seq file table rules refs #20280
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    85af5b05fba85ff364442b39139f4592f5862932 Thu Nov 8 11:50:41 2018 -0800
    adding bosTau9 rules refs #22425
• src/hg/makeDb/trackDb/cow/bosTau9/description.html
  • lines changed 64, context: html, text, full: html, text
    520d57f838925d11fcf21da4b41eee5359ecc7f4 Tue Nov 6 13:23:46 2018 -0800
    adding bosTau9 to the build refs #22425
• src/hg/makeDb/trackDb/cow/bosTau9/gap.html
  • lines changed 29, context: html, text, full: html, text
    520d57f838925d11fcf21da4b41eee5359ecc7f4 Tue Nov 6 13:23:46 2018 -0800
    adding bosTau9 to the build refs #22425
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    f0c97e8e3eb888112e3ad6287dbbfe04ef11fb62 Thu Nov 8 12:55:40 2018 -0800
    indicate no gaps and hid the gap track refs #22425
• src/hg/makeDb/trackDb/cow/bosTau9/gold.html
  • lines changed 34, context: html, text, full: html, text
    520d57f838925d11fcf21da4b41eee5359ecc7f4 Tue Nov 6 13:23:46 2018 -0800
    adding bosTau9 to the build refs #22425
• src/hg/makeDb/trackDb/cow/bosTau9/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    520d57f838925d11fcf21da4b41eee5359ecc7f4 Tue Nov 6 13:23:46 2018 -0800
    adding bosTau9 to the build refs #22425
  • lines changed 6, context: html, text, full: html, text
    2b9cfcbece1a18da8d98c50a5d39483035590d6e Tue Nov 6 15:28:03 2018 -0800
    add assembly/gold table search rule refs #22425
  • lines changed 2, context: html, text, full: html, text
    f0c97e8e3eb888112e3ad6287dbbfe04ef11fb62 Thu Nov 8 12:55:40 2018 -0800
    indicate no gaps and hid the gap track refs #22425
• src/hg/makeDb/trackDb/makefile
  • lines changed 1, context: html, text, full: html, text
    520d57f838925d11fcf21da4b41eee5359ecc7f4 Tue Nov 6 13:23:46 2018 -0800
    adding bosTau9 to the build refs #22425
• src/hg/utils/automation/makeGenomeDb.pl
  • lines changed 12, context: html, text, full: html, text
    0c13306bc9defeac3d959a73c2942e41cf6a6014 Thu Nov 8 13:02:46 2018 -0800
    properly indicate no gaps refs #22425
• src/inc/srcVersion.h
  • lines changed 1, context: html, text, full: html, text
    94ca49469aa9a2c7eb6d58ce0ca45eaa3289db2c Mon Nov 12 10:02:08 2018 -0800
    New version number v374
• src/utils/qa/weeklybld/buildEnv.csh
  • lines changed 3, context: html, text, full: html, text
    ca74493524f26c4dc389d376b6ad36940004a8a4 Mon Nov 12 10:01:25 2018 -0800
    v374 final build, refs #22357