All File Changes

v374_base to v375_preview (2018-11-12 to 2018-11-26) v375

• src/browserbox/root/updateBrowser.sh
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    a2005a50d859471971af5226377e68cd241ed2e5 Wed Nov 14 15:33:39 2018 -0800
    hgdownload-euro is online now so allow gbibs to load from there, refs jorge's presentation
• src/hg/htdocs/FAQ/FAQdownloads.html
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    61f36f1d502406f29d86b14e23b77f93b57b0713 Thu Nov 15 15:19:20 2018 -0800
    editing FAQdownloads, credits & newsarch to cover CR recommendations, <100 char per line, adding sapces in front of <li> items, refs #22457
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    0b077d67a127f398bf7e7d32e66176fe7bea4680 Fri Nov 16 15:47:17 2018 -0800
    Clarified wording, added link to updated genePredToGtf wiki page
• src/hg/htdocs/FAQ/FAQreleases.html
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    149f4ca90b6040c472fff3405953c3d5974b59f5 Tue Nov 13 09:16:14 2018 -0800
    adding static docs & trackDb.ra for ponAbe3, refs #20980
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    32109a7c1c8996b847027bf8aef6332db9034602 Tue Nov 20 17:25:43 2018 -0800
    Adding release notes and credits for chicken
• src/hg/htdocs/goldenPath/credits.html
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    61f36f1d502406f29d86b14e23b77f93b57b0713 Thu Nov 15 15:19:20 2018 -0800
    editing FAQdownloads, credits & newsarch to cover CR recommendations, <100 char per line, adding sapces in front of <li> items, refs #22457
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    32109a7c1c8996b847027bf8aef6332db9034602 Tue Nov 20 17:25:43 2018 -0800
    Adding release notes and credits for chicken
• src/hg/htdocs/goldenPath/help/hgSessionHelp.html
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    d2aec6e23cda97ac528c03eb4a76c27d3f10e93f Wed Nov 21 22:07:24 2018 -0800
    added embedded video for hgSessions
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    d0b376ddf519a938ce3fe11621168184d9c6de91 Thu Nov 22 10:15:00 2018 -0800
    added word Help to session help doc
• src/hg/htdocs/goldenPath/help/hgTablesHelp.html
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    e0aa693534ed73e1629d23b94d904f0e1faa87ad Thu Nov 22 09:43:13 2018 -0800
    embedded video examples of TB queries. fixed an open em tag that made half the doc italic.
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    1fa427936fae0d46dc05d1e59d93fc2c62670721 Thu Nov 22 09:51:06 2018 -0800
    added word help to title
• src/hg/htdocs/goldenPath/help/multiRegionHelp.html
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    79d3bdc92c3fc02fd11224bef95e08b9372130d9 Tue Nov 20 10:56:30 2018 -0800
    added embedded videos for multi-region mode to help page
• src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml
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    c5c116a43e747df60d02c93c989847a195789894 Wed Nov 21 22:23:45 2018 -0800
    changed than to then in if/then
• src/hg/htdocs/goldenPath/newsarch.html
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    149f4ca90b6040c472fff3405953c3d5974b59f5 Tue Nov 13 09:16:14 2018 -0800
    adding static docs & trackDb.ra for ponAbe3, refs #20980
  • lines changed 52, context: html, text, full: html, text
    0ca70831b1ebbcd852a715d48347e0479b4c408b Tue Nov 13 11:05:02 2018 -0800
    changing dates on announcements so only 1/day, no redmine
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    61f36f1d502406f29d86b14e23b77f93b57b0713 Thu Nov 15 15:19:20 2018 -0800
    editing FAQdownloads, credits & newsarch to cover CR recommendations, <100 char per line, adding sapces in front of <li> items, refs #22457
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    fb554b3617fdfc9144820c203542c1842db73573 Fri Nov 16 09:12:47 2018 -0800
    Announcing the GENCODE Genes track for hg38, refs #21644
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    8ade3e0c8fb3af3ac175fb8acf4825f6dbe3cb59 Fri Nov 16 10:40:39 2018 -0800
    Fixing a typo. There was an extra 'the' in my announcement, refs #21644
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    9b05932a3ce8f91b8439025e79d07b895f295561 Fri Nov 16 10:44:15 2018 -0800
    Adding a missing 'of', refs #21644
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    7e15cb3fbff6dc1bc4644388105ddb5bf2dedd69 Fri Nov 16 10:55:33 2018 -0800
    uncommenting out ponAbe3 release from indexNews and newsarch, refs #20980
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    d26c93ceb67b82c5f818dfa2e0f89eeb0e7117d1 Mon Nov 19 09:51:39 2018 -0800
    Adding ponAbe full name on newsarch.html, refs #20980
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    32109a7c1c8996b847027bf8aef6332db9034602 Tue Nov 20 17:25:43 2018 -0800
    Adding release notes and credits for chicken
• src/hg/htdocs/images/phylo/galGal6_77way.png
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    0a141688b269119ba6660a949a6229435e3577a3 Mon Nov 12 14:04:09 2018 -0800
    phylo diagram for 77-way on Chicken refs #22113
• src/hg/htdocs/indexNews.html
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    149f4ca90b6040c472fff3405953c3d5974b59f5 Tue Nov 13 09:16:14 2018 -0800
    adding static docs & trackDb.ra for ponAbe3, refs #20980
  • lines changed 13, context: html, text, full: html, text
    0ca70831b1ebbcd852a715d48347e0479b4c408b Tue Nov 13 11:05:02 2018 -0800
    changing dates on announcements so only 1/day, no redmine
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    fb554b3617fdfc9144820c203542c1842db73573 Fri Nov 16 09:12:47 2018 -0800
    Announcing the GENCODE Genes track for hg38, refs #21644
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    7e15cb3fbff6dc1bc4644388105ddb5bf2dedd69 Fri Nov 16 10:55:33 2018 -0800
    uncommenting out ponAbe3 release from indexNews and newsarch, refs #20980
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    32109a7c1c8996b847027bf8aef6332db9034602 Tue Nov 20 17:25:43 2018 -0800
    Adding release notes and credits for chicken
• src/hg/htdocs/training/index.html
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    977531b1b5ab91fea08ed678be38f1b9325c9278 Fri Nov 16 11:27:37 2018 -0800
    removing completed UCLA workshop. Putting PAG in coming-soon spot. added hudson alpha to future list
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    15d22be91309ea43b6f71620d05624c74d540720 Wed Nov 21 13:36:31 2018 -0800
    added some future stuff and promoted TGEN workshop to show the date. Also fixed a date from 2018 to 2019
• src/hg/lib/bigBedLabel.c
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    8563e44191c6433f3f7a4bc519061f090d15ef44 Wed Nov 14 12:54:41 2018 -0800
    walk up the tree to find cart variables to use as labelFields
• src/hg/lib/hui.c
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    b53daca8cdd27a292f6ae01f8aeb822a2b4468dc Wed Nov 14 11:29:56 2018 -0800
    fix bug found in code review. Thanks Chris!
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    6c9a90b6f01e54fd17eb775814c12b82664a9709 Thu Nov 15 10:42:12 2018 -0800
    use escaped comma parsing for filterBy settings
• src/hg/lib/sqlProg.c
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    08fb35f066888f31ecbfcb4a5a1517c58413c27c Thu Nov 15 16:09:21 2018 -0800
    fixing a problem with mysqldump and profile.db settings that messed it up. Now it comments out the database= setting, but only if it is mysqldump running.
• src/hg/makeDb/doc/dm6/multiz124way.txt
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    e7cb3a2f3835ce953dfa1628a0bb7e51ea509dfc Thu Nov 22 11:35:19 2018 -0800
    working through rBest and synNet additions refs #18874
• src/hg/makeDb/doc/mm10.txt
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    a0cd6f947c42ef2dd177f0feeebbf58392e877fb Fri Nov 16 08:30:55 2018 -0800
    finisning off cotJap2 lastz chainNet refs #22330
• src/hg/makeDb/doc/mouseStrains/hub.txt
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    763b6a901263e1543b6a6906868f3140dc4a8882 Mon Nov 19 15:22:10 2018 -0800
    Adding the update of the hub.txt for the mouseStrains hub, Daniel made better labels refs #22420
• src/hg/makeDb/genbank/etc/build-genbank
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    1ddcf0176ff336933b8446c0ff94ab88cb7cb020 Mon Nov 19 17:48:10 2018 -0800
    ongoing work to otto-mate the genbank build on the genbank-101
• src/hg/makeDb/genbank/etc/dbload
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    1ddcf0176ff336933b8446c0ff94ab88cb7cb020 Mon Nov 19 17:48:10 2018 -0800
    ongoing work to otto-mate the genbank build on the genbank-101
• src/hg/makeDb/genbank/etc/gbMetadataTables.txt
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    1ddcf0176ff336933b8446c0ff94ab88cb7cb020 Mon Nov 19 17:48:10 2018 -0800
    ongoing work to otto-mate the genbank build on the genbank-101
• src/hg/makeDb/genbank/etc/genbank-dbload
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    1ddcf0176ff336933b8446c0ff94ab88cb7cb020 Mon Nov 19 17:48:10 2018 -0800
    ongoing work to otto-mate the genbank build on the genbank-101
• src/hg/makeDb/genbank/etc/hgwbeta.dbs
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    e252ce98f3d332e8462e19618eb3d8a281168ea6 Tue Nov 13 15:52:07 2018 -0800
    Moved assemblies names to specify newest assemblies in top list and older assemblies in bottom list. No redmine
• src/hg/makeDb/genbank/etc/rr.dbs
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    8e40bf7b019693abf6f96b4b5b62e0e0bea5207b Fri Nov 16 10:48:25 2018 -0800
    Adding galGal6 to genbank update list
• src/hg/makeDb/schema/all.joiner
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    6bceda21dba3d2e6057fab600df7e1204c57abb5 Tue Nov 20 09:50:42 2018 -0800
    Tweaking snp151Seq minCheck for hg19 vs. hg38. refs #21010 notes 46-47.
• src/hg/makeDb/trackDb/allenBrainAli.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
    Updating redirected links for hg18, uiLinks cronjob.
• src/hg/makeDb/trackDb/chicken/galGal6/chainNetBirds.ra
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    491b69e7de27644b441d05ad109a7aeeed9265a8 Thu Nov 15 12:08:22 2018 -0800
    Adding alpha release tags for unapproved chains
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    23fba629435eab54be444a446f2dceb5d7edac69 Thu Nov 15 15:58:24 2018 -0800
    Removing release tags that broke the group system
• src/hg/makeDb/trackDb/chicken/galGal6/chainNetFish.ra
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    491b69e7de27644b441d05ad109a7aeeed9265a8 Thu Nov 15 12:08:22 2018 -0800
    Adding alpha release tags for unapproved chains
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    23fba629435eab54be444a446f2dceb5d7edac69 Thu Nov 15 15:58:24 2018 -0800
    Removing release tags that broke the group system
• src/hg/makeDb/trackDb/chicken/galGal6/chainNetvertebrate.ra
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    fdb534fd87419bde91eb61c4a4051d5debf06b90 Thu Nov 15 12:04:50 2018 -0800
    Removing release tags for RR
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    ce709b9231e88f561bbaff55943b1506441b55e5 Thu Nov 15 14:52:36 2018 -0800
    Removing typo from group
• src/hg/makeDb/trackDb/chicken/galGal6/crispr10K.ra
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    23fba629435eab54be444a446f2dceb5d7edac69 Thu Nov 15 15:58:24 2018 -0800
    Removing release tags that broke the group system
• src/hg/makeDb/trackDb/chicken/galGal6/refSeqComposite.ra
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    e48f0eff94a589cd8d140f28b2bfdfb604919a9e Thu Nov 15 15:16:24 2018 -0800
    setting refSeq to pack instead of full
• src/hg/makeDb/trackDb/chicken/galGal6/trackDb.77way.ra
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    4deb373f1116ba0c9055214294321596c125138d Mon Nov 12 15:03:15 2018 -0800
    adding 77-way track definition for galGal6 refs #22113
• src/hg/makeDb/trackDb/chicken/galGal6/trackDb.ra
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    d28684d65cec1b584334acd7f6373519206dec0d Thu Nov 15 11:10:12 2018 -0800
    adding first look at 77-way alignment refs #22113
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    fdb534fd87419bde91eb61c4a4051d5debf06b90 Thu Nov 15 12:04:50 2018 -0800
    Removing release tags for RR
• src/hg/makeDb/trackDb/cow/bosTau9/trackDb.ra
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    cb2309803f71d2ee426fe07d1af9f2b6ad0b2873 Mon Nov 19 22:39:29 2018 -0800
    adding crispr 10K track refs @22425
• src/hg/makeDb/trackDb/drosophila/bdtnpChipper.html
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    9250fc99f7660eef25ee58b9751804e80866be16 Tue Nov 20 09:19:01 2018 -0800
    Updating redirected links for dm3, uiLinks cronjob, no Redmine.
• src/hg/makeDb/trackDb/drosophila/bdtnpChipperOld.html
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    9250fc99f7660eef25ee58b9751804e80866be16 Tue Nov 20 09:19:01 2018 -0800
    Updating redirected links for dm3, uiLinks cronjob, no Redmine.
• src/hg/makeDb/trackDb/drosophila/bdtnpDnase.html
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    9250fc99f7660eef25ee58b9751804e80866be16 Tue Nov 20 09:19:01 2018 -0800
    Updating redirected links for dm3, uiLinks cronjob, no Redmine.
• src/hg/makeDb/trackDb/drosophila/dm6/chainNetInsects.ra
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    d41cbe89746e2c41c6d94584ffbc93ad1e3542c4 Tue Nov 20 14:43:25 2018 -0800
    all three sets of chains now available refs #18874
• src/hg/makeDb/trackDb/drosophila/dm6/chainNetRBestInsects.ra
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    d41cbe89746e2c41c6d94584ffbc93ad1e3542c4 Tue Nov 20 14:43:25 2018 -0800
    all three sets of chains now available refs #18874
• src/hg/makeDb/trackDb/drosophila/dm6/chainNetSynInsects.ra
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    d41cbe89746e2c41c6d94584ffbc93ad1e3542c4 Tue Nov 20 14:43:25 2018 -0800
    all three sets of chains now available refs #18874
• src/hg/makeDb/trackDb/drosophila/dm6/insectsChainNet.ra
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    9ae8fcb69fad645ab95f8fa09c47405953d3dcd2 Tue Nov 20 09:36:27 2018 -0800
    adding composite chainNet for all insects refs #18874
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    37a0519da9825daa61bce6feb8bb169c85f662e9 Tue Nov 20 14:44:16 2018 -0800
    renamed insectsChainNet.ra to chainNetInsects.ra refs #18874
• src/hg/makeDb/trackDb/drosophila/dm6/trackDb.124way.ra
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    91ea7d5eee97af8a6b47cca5b55b85e3ea91f9a0 Fri Nov 16 14:01:39 2018 -0800
    first look at 124 way on dm6 refs #18874
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    742cfb5f442f3f04512d6e17fed32ce88ddb551e Fri Nov 16 14:53:47 2018 -0800
    better ordering refs #18877
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    eba3a59422282ebef5e353fae71615d45dafe0c9 Fri Nov 16 15:22:05 2018 -0800
    better short label for now refs #18874
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    a2e99c86ea50bb99ac9d2c2f57769ba0941f366d Mon Nov 19 22:06:58 2018 -0800
    three group division refs #18874
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    45f96b3272cc8d450e75d32100357cb6f6dc737a Sun Nov 25 20:50:09 2018 -0800
    setting up release 124way refs #18874
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    bbed086b6a948fdf84ca2908c0e401c889af42a6 Sun Nov 25 22:02:26 2018 -0800
    turn on frames for everything refs #18874
• src/hg/makeDb/trackDb/drosophila/dm6/trackDb.124wayMafNet.ra
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    1d9fbcbd283889ffe8d997ae915755ae80023a51 Mon Nov 19 21:54:57 2018 -0800
    adding mafNet 124way multiz display refs #18874
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    9ae8fcb69fad645ab95f8fa09c47405953d3dcd2 Tue Nov 20 09:36:27 2018 -0800
    adding composite chainNet for all insects refs #18874
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    1b431fe8b0f80e2c375cbc16afb636b06919f987 Fri Nov 23 19:37:15 2018 -0800
    setting up the three examples refs #18874
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    45f96b3272cc8d450e75d32100357cb6f6dc737a Sun Nov 25 20:50:09 2018 -0800
    setting up release 124way refs #18874
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    29884f656b3f386ce11e67111eb2ad31f52d4f4d Sun Nov 25 22:07:29 2018 -0800
    turn on frames for everything refs #18874
• src/hg/makeDb/trackDb/drosophila/dm6/trackDb.124wayRbest.ra
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    aa0529837b67e17e29b6b32b3b55472c2262df33 Thu Nov 22 11:46:12 2018 -0800
    adding RBest net composite refs #18874
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    1b431fe8b0f80e2c375cbc16afb636b06919f987 Fri Nov 23 19:37:15 2018 -0800
    setting up the three examples refs #18874
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    45f96b3272cc8d450e75d32100357cb6f6dc737a Sun Nov 25 20:50:09 2018 -0800
    setting up release 124way refs #18874
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    29884f656b3f386ce11e67111eb2ad31f52d4f4d Sun Nov 25 22:07:29 2018 -0800
    turn on frames for everything refs #18874
• src/hg/makeDb/trackDb/drosophila/dm6/trackDb.124waySyn.ra
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    1b431fe8b0f80e2c375cbc16afb636b06919f987 Fri Nov 23 19:37:15 2018 -0800
    setting up the three examples refs #18874
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    45f96b3272cc8d450e75d32100357cb6f6dc737a Sun Nov 25 20:50:09 2018 -0800
    setting up release 124way refs #18874
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    29884f656b3f386ce11e67111eb2ad31f52d4f4d Sun Nov 25 22:07:29 2018 -0800
    turn on frames for everything refs #18874
• src/hg/makeDb/trackDb/drosophila/dm6/trackDb.ra
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    91ea7d5eee97af8a6b47cca5b55b85e3ea91f9a0 Fri Nov 16 14:01:39 2018 -0800
    first look at 124 way on dm6 refs #18874
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    1d9fbcbd283889ffe8d997ae915755ae80023a51 Mon Nov 19 21:54:57 2018 -0800
    adding mafNet 124way multiz display refs #18874
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    9ae8fcb69fad645ab95f8fa09c47405953d3dcd2 Tue Nov 20 09:36:27 2018 -0800
    adding composite chainNet for all insects refs #18874
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    d41cbe89746e2c41c6d94584ffbc93ad1e3542c4 Tue Nov 20 14:43:25 2018 -0800
    all three sets of chains now available refs #18874
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    aa0529837b67e17e29b6b32b3b55472c2262df33 Thu Nov 22 11:46:12 2018 -0800
    adding RBest net composite refs #18874
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    684c491f8d356c00fe850d9adc6827b6b2f728b0 Thu Nov 22 22:37:21 2018 -0800
    turn on crispr 10K track, no redmine
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    1b431fe8b0f80e2c375cbc16afb636b06919f987 Fri Nov 23 19:37:15 2018 -0800
    setting up the three examples refs #18874
• src/hg/makeDb/trackDb/drosophila/evofold.html
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    9250fc99f7660eef25ee58b9751804e80866be16 Tue Nov 20 09:19:01 2018 -0800
    Updating redirected links for dm3, uiLinks cronjob, no Redmine.
• src/hg/makeDb/trackDb/ebola/eboVir3/cons160way.html
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    e671bbe1e2af074e2785616d8cc484a3c2b75f86 Mon Nov 19 09:41:07 2018 -0800
    Updating redirected links for eboVir3, uiLinks cronjob.
• src/hg/makeDb/trackDb/ebola/eboVir3/muPIT.html
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    e671bbe1e2af074e2785616d8cc484a3c2b75f86 Mon Nov 19 09:41:07 2018 -0800
    Updating redirected links for eboVir3, uiLinks cronjob.
• src/hg/makeDb/trackDb/ebola/eboVir3/pdb.html
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    e671bbe1e2af074e2785616d8cc484a3c2b75f86 Mon Nov 19 09:41:07 2018 -0800
    Updating redirected links for eboVir3, uiLinks cronjob.
• src/hg/makeDb/trackDb/ebola/eboVir3/spAnnot.html
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    e671bbe1e2af074e2785616d8cc484a3c2b75f86 Mon Nov 19 09:41:07 2018 -0800
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• src/hg/makeDb/trackDb/ebola/eboVir3/spMut.html
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    e671bbe1e2af074e2785616d8cc484a3c2b75f86 Mon Nov 19 09:41:07 2018 -0800
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• src/hg/makeDb/trackDb/ebola/eboVir3/spStruct.html
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    e671bbe1e2af074e2785616d8cc484a3c2b75f86 Mon Nov 19 09:41:07 2018 -0800
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• src/hg/makeDb/trackDb/geneid.html
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    5429df7fc7bdb3621ad921c66b0c2213fe42d8c7 Wed Nov 21 08:44:46 2018 -0800
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• src/hg/makeDb/trackDb/gorilla/gorGor3/cons11way.html
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    5429df7fc7bdb3621ad921c66b0c2213fe42d8c7 Wed Nov 21 08:44:46 2018 -0800
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• src/hg/makeDb/trackDb/gorilla/gorGor3/gap.html
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    5429df7fc7bdb3621ad921c66b0c2213fe42d8c7 Wed Nov 21 08:44:46 2018 -0800
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• src/hg/makeDb/trackDb/gorilla/gorGor3/gold.html
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    5429df7fc7bdb3621ad921c66b0c2213fe42d8c7 Wed Nov 21 08:44:46 2018 -0800
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• src/hg/makeDb/trackDb/human/chainNetPlacental.ra
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    dcc4683d888ab5de32dc25d135f298426f0ab5b5 Thu Nov 15 11:06:44 2018 -0800
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• src/hg/makeDb/trackDb/human/encodeAffyChIpHl60PvalStrict.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/encodeAffyChIpHl60SignalStrict.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/encodeAffyChIpHl60SitesStrict.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/encodeAffyChipSuper.html
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• src/hg/makeDb/trackDb/human/encodeAffyEcSignal.html
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• src/hg/makeDb/trackDb/human/encodeAffyEcSites.html
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• src/hg/makeDb/trackDb/human/encodeAffyEcSuper.html
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• src/hg/makeDb/trackDb/human/encodeEgaspFull.html
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• src/hg/makeDb/trackDb/human/encodeEgaspPartial.html
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• src/hg/makeDb/trackDb/human/encodeEgaspSuper.html
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• src/hg/makeDb/trackDb/human/encodeEgaspUpdate.html
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• src/hg/makeDb/trackDb/human/encodeGencodeGeneOct05.html
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• src/hg/makeDb/trackDb/human/encodeGencodeIntronOct05.html
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• src/hg/makeDb/trackDb/human/encodePseudogene.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/encodeUncFaire.html
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• src/hg/makeDb/trackDb/human/encodeUtexChip.html
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• src/hg/makeDb/trackDb/human/encodeUtexChipSuper.html
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• src/hg/makeDb/trackDb/human/encodeYaleChIPSTAT1Pval.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/encodeYaleChIPSTAT1Sig.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/encodeYaleChIPSTAT1Sites.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/evofold.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/gwasCatalog.html
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• src/hg/makeDb/trackDb/human/hapmapSnps.html
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• src/hg/makeDb/trackDb/human/hg18/HInvGeneMrna.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/chainSelf.html
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• src/hg/makeDb/trackDb/human/hg18/cnp.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/cons44way.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/consIndelsHgMmCanFam.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeAffyRnaSignal.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeAffyRnaSuper.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeAffyRnaTransfrags.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeBUORChID.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeNhgriDukeDnaseHs.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeSangerChip.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeUCDavisChip.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeUcDavisChipHits.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeUcDavisChipSuper.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeUcsdNgGif.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeYaleChipPval.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeYaleChipSig.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeYaleChipSites.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/encodeYaleChipSuper.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/evofoldV2.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/exoniphy.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/knownGene.html
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• src/hg/makeDb/trackDb/human/hg18/mammalPsg.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/mostConserved28way.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/multiz17way.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/multiz28way.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/pgSnp.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/phastConsElements17way.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/phyloPCons28way.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/uwNucOcc.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/uwNucOccA375.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/uwNucOccDennis.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/uwNucOccMec.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/wgEncodeCaltechRnaSeq.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/wgEncodeGisChipPetAll.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/wgEncodeMapability.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg18/wgRna.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
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• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
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    afb7153ff5e519bc268c260e560e5580bcb93a9a Mon Nov 12 10:55:22 2018 -0800
    Adding beta to crispr10k release tags ref#21987
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    7506ae932db9267b493e8ac1cf3c341c66aad4a0 Tue Nov 13 09:35:38 2018 -0800
    Removing the beta tags since this is a Regeneron track. Not to be released yet ref#21987
• src/hg/makeDb/trackDb/human/hg38/knownGene.html
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    217f7d6b4dbb3f78b279f5ff1337cd3c8f4ed645 Fri Nov 16 09:39:15 2018 -0800
    Adding changes from the knownGene.alpha.html file to the regular knownGene.html page now that it is about to be released, refs #21644
• src/hg/makeDb/trackDb/human/hg38/knownGene.ra
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    54bdcddbe937303aad89cf633a4da5059bac4fbd Fri Nov 16 09:40:06 2018 -0800
    Releasing GENCODE Genes v29 for hg38, refs #21644
• src/hg/makeDb/trackDb/human/hg38/trackDb.ra
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    afb7153ff5e519bc268c260e560e5580bcb93a9a Mon Nov 12 10:55:22 2018 -0800
    Adding beta to crispr10k release tags ref#21987
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    7506ae932db9267b493e8ac1cf3c341c66aad4a0 Tue Nov 13 09:35:38 2018 -0800
    Removing the beta tags since this is a Regeneron track. Not to be released yet ref#21987
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    54bdcddbe937303aad89cf633a4da5059bac4fbd Fri Nov 16 09:40:06 2018 -0800
    Releasing GENCODE Genes v29 for hg38, refs #21644
• src/hg/makeDb/trackDb/human/phastBias.html
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    150b8291d3441215005e141c831fe86b2b7aafb4 Tue Nov 13 14:29:38 2018 -0800
    Updating redirected links for hg18, uiLinks cronjob.
• src/hg/makeDb/trackDb/human/snp151.shared.html
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    afa40a3fb3e52177c538f6319f9d95958aa9cee1 Mon Nov 19 15:32:01 2018 -0800
    Updating redirected links and broken links on the snp151 shared html page, refs #21010
• src/hg/makeDb/trackDb/mouse/mm10/trackDb.placentalsChainNet.ra
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    dcc4683d888ab5de32dc25d135f298426f0ab5b5 Thu Nov 15 11:06:44 2018 -0800
    adding bosTau9 chainNet definitions refs #22425
• src/hg/makeDb/trackDb/orangutan/ponAbe3/trackDb.chainNet.ra
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    a2700acf89242a26b63eb8786e520de96a6a1475 Tue Nov 13 10:26:38 2018 -0800
    trackDb.chainNet for ponAbe3, refs #20980
• src/hg/makeDb/trackDb/orangutan/ponAbe3/trackDb.ra
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    149f4ca90b6040c472fff3405953c3d5974b59f5 Tue Nov 13 09:16:14 2018 -0800
    adding static docs & trackDb.ra for ponAbe3, refs #20980
• src/hg/makeDb/trackDb/patSeq.html
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    e671bbe1e2af074e2785616d8cc484a3c2b75f86 Mon Nov 19 09:41:07 2018 -0800
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• src/hg/makeDb/trackDb/tagTypes.tab
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