File Changes for kate

v380_preview2 to v380_base (2019-04-01 to 2019-04-08) v380

• src/hg/makeDb/doc/encode3/tfbs.txt
  • lines changed 447, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
• src/hg/makeDb/doc/encodeRegHg19.txt
  • lines changed 1, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
• src/hg/makeDb/hgBedsToBedExps/bedExpsToFactorSource.pl
  • lines changed 46, context: html, text, full: html, text
    f464e85e868ff6c5ef8d97c24cb990078a8fd723 Wed Apr 3 11:28:55 2019 -0700
    Tools for factorSource format. refs #21139
• src/hg/makeDb/hgBedsToBedExps/factorSourceCheckScore.pl
  • lines changed 26, context: html, text, full: html, text
    f464e85e868ff6c5ef8d97c24cb990078a8fd723 Wed Apr 3 11:28:55 2019 -0700
    Tools for factorSource format. refs #21139
• src/hg/makeDb/outside/encode3/tfbs/dac_dec2018/README.txt
  • lines changed 1, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
• src/hg/makeDb/outside/encode3/tfbs/dac_dec2018/makeFilelist.pl
  • lines changed 31, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
• src/hg/makeDb/outside/encode3/tfbs/dac_dec2018/makeInputs.pl
  • lines changed 30, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
• src/hg/makeDb/outside/encode3/tfbs/dac_dec2018/makeTrackDb.pl
  • lines changed 29, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
• src/hg/makeDb/trackDb/human/encode3RegTfbsCluster.html
  • lines changed 140, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
• src/hg/makeDb/trackDb/human/hg19/encode3.ra
  • lines changed 8911, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
  • lines changed 2, context: html, text, full: html, text
    3f6f7810a3a55c96f40b38fee3e7574fe2d016c0 Wed Apr 3 14:45:50 2019 -0700
    Tweak laels and priorities. refs #21139
  • lines changed 3, context: html, text, full: html, text
    702027afdbe700e69a3f553baf1e0341aad2bd27 Thu Apr 4 14:23:17 2019 -0700
    Fix handling of release tag (make tdbQuery -release=beta happy)
  • lines changed 474, context: html, text, full: html, text
    ad7467196611835c90cc7eed12dbcf973fc6a7ae Thu Apr 4 14:26:49 2019 -0700
    Remove debug tracks. refs #21139
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 2, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
  • lines changed 1, context: html, text, full: html, text
    702027afdbe700e69a3f553baf1e0341aad2bd27 Thu Apr 4 14:23:17 2019 -0700
    Fix handling of release tag (make tdbQuery -release=beta happy)
• src/hg/makeDb/trackDb/human/hg38/encode3.ra
  • lines changed 8862, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
  • lines changed 5, context: html, text, full: html, text
    ee7b1156b945e6a7768a20128926c13b9c18e040 Wed Apr 3 12:16:23 2019 -0700
    Add defaults (a few arbitrary) to composite. refs #23243
  • lines changed 7, context: html, text, full: html, text
    3f6f7810a3a55c96f40b38fee3e7574fe2d016c0 Wed Apr 3 14:45:50 2019 -0700
    Tweak laels and priorities. refs #21139
  • lines changed 2, context: html, text, full: html, text
    702027afdbe700e69a3f553baf1e0341aad2bd27 Thu Apr 4 14:23:17 2019 -0700
    Fix handling of release tag (make tdbQuery -release=beta happy)
  • lines changed 473, context: html, text, full: html, text
    ad7467196611835c90cc7eed12dbcf973fc6a7ae Thu Apr 4 14:26:49 2019 -0700
    Remove debug tracks. refs #21139
• src/hg/makeDb/trackDb/human/hg38/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    d87e5f63bc000d560c21bca638b6d5f3dee0173d Wed Apr 3 12:06:45 2019 -0700
    Add scripts and make docs for ENCODE 3 TF binding site tracks. refs #21139
  • lines changed 1, context: html, text, full: html, text
    702027afdbe700e69a3f553baf1e0341aad2bd27 Thu Apr 4 14:23:17 2019 -0700
    Fix handling of release tag (make tdbQuery -release=beta happy)