Commits for hiram

v379_base to v380_preview (2019-03-18 to 2019-03-25) v380

d2429b17bb096f6c406a2ae03fb5593f27fa53c1 Mon Mar 18 14:17:07 2019 -0700

• hash up the output properly for hubPublic and dbDb outputs refs #18869
  • src/hg/hubApi/apiUtils.c - lines changed 19, context: html, text, full: html, text
  • src/hg/hubApi/dataApi.h - lines changed 3, context: html, text, full: html, text
  • src/hg/hubApi/getData.c - lines changed 3, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hubApi/list.c - lines changed 58, context: html, text, full: html, text

0639a91e1aee8fa54c7834eb8012c16a4accd877 Tue Mar 19 08:38:36 2019 -0700

• eliminate source version from outputs and expected no redmine
  • src/utils/findMotif/tests/expected/test1.txt.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
  • src/utils/findMotif/tests/expected/test2.txt.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
  • src/utils/findMotif/tests/expected/test3.txt.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
  • src/utils/findMotif/tests/expected/test4.txt.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
  • src/utils/findMotif/tests/expected/test7.txt.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
  • src/utils/findMotif/tests/makefile - lines changed 5, context: html, text, full: html, text

dc68ca87c184d7a6d4112e293073bddb34a9e913 Tue Mar 19 10:36:54 2019 -0700

• full reporting of all track names in html display even when not in detail mode refs #18869
  • src/hg/hubApi/hubApi.c - lines changed 40, context: html, text, full: html, text

0dbf3efc8d7c425510c124204883708273691ec8 Tue Mar 19 13:36:44 2019 -0700

• correctly listing full set of tracks for a hub or database with all attributes refs #18869
  • src/hg/hubApi/list.c - lines changed 65, context: html, text, full: html, text

0f8ec54de20313713243e8d359449f28cfb4514d Tue Mar 19 14:22:48 2019 -0700

• object data outputs refs #18869
  • src/hg/hubApi/getData.c - lines changed 44, context: html, text, full: html, text

f72d8b57a77755e64ef594ae2d4395a12c19712d Tue Mar 19 21:46:37 2019 -0700

• now showing a sample getData URL for supported tracks refs #18869
  • src/hg/hubApi/getData.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 150, context: html, text, full: html, text

e27f427561241ab8dd9e881f082c1e68007e6dfe Wed Mar 20 09:48:44 2019 -0700

• correctly exclude vars for hgwdev-api URL functions refs #18869
  • src/hg/hubApi/hubApi.c - lines changed 58, context: html, text, full: html, text

f6772f5e8a7399f1430561d708c3dcf033241cc8 Wed Mar 20 15:27:49 2019 -0700

• consolidate the tableDataOutput functions refs #18869
  • src/hg/hubApi/dataApi.h - lines changed 1, context: html, text, full: html, text
  • src/hg/hubApi/getData.c - lines changed 114, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 17, context: html, text, full: html, text

377a0776897437992e3b9080c73d8c78f7fc7470 Wed Mar 20 18:11:40 2019 -0700

• adding hubPublic.c and .h refs #18869
  • src/hg/inc/hubPublic.h - lines changed 87, context: html, text, full: html, text
  • src/hg/lib/hubPublic.c - lines changed 259, context: html, text, full: html, text
  • src/hg/lib/hubPublic.sql - lines changed 1, context: html, text, full: html, text

626dbc4d58f93cea274d5e4ff4ceba59c0ed40b7 Wed Mar 20 18:11:54 2019 -0700

• adding hubPublic.c and .h refs #18869
  • src/hg/lib/makefile - lines changed 1, context: html, text, full: html, text

b7749ec648f88880da646bca0bba1a14f288639c Wed Mar 20 18:13:15 2019 -0700

• adding hubPublic.c and .h to library refs #18869
  • src/hg/hubApi/dataApi.h - lines changed 16, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 114, context: html, text, full: html, text
  • src/hg/hubApi/list.c - lines changed 1, context: html, text, full: html, text

9c28afc6ca0b8e2b4404ab7a894925e8f5fcf62b Thu Mar 21 11:11:54 2019 -0700

• begin round of consolidation and simplification refs #18869
  • src/hg/hubApi/dataApi.h - lines changed 7, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 173, context: html, text, full: html, text
  • src/hg/hubApi/list.c - lines changed 2, context: html, text, full: html, text

046c975630f6576722e8cbfa843e68f6068d854e Thu Mar 21 15:06:42 2019 -0700

• somewhat better for sample data URLs refs #18869
  • src/hg/hubApi/dataApi.h - lines changed 3, context: html, text, full: html, text
  • src/hg/hubApi/getData.c - lines changed 88, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 103, context: html, text, full: html, text

4d72ed9554069edb885ff2f793add75e422a5459 Thu Mar 21 15:58:39 2019 -0700

• error catch aroung bbi file open and better sample getData links refs #18869
  • src/hg/hubApi/getData.c - lines changed 10, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 61, context: html, text, full: html, text

5194786c88bd4ab5e802eec79089897461389fe9 Fri Mar 22 14:52:22 2019 -0700

• getting a little bit better refs #18869
  • src/hg/hubApi/getData.c - lines changed 28, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 240, context: html, text, full: html, text

bbed927851c49abc7a66c8ed6350dfa99cebb189 Fri Mar 22 15:11:31 2019 -0700

• clean up some long duplicated strings refs #18869
  • src/hg/hubApi/hubApi.c - lines changed 26, context: html, text, full: html, text

d7823be63582aafb32001891aafe2573bd550b91 Fri Mar 22 15:31:47 2019 -0700

• help text for API interface refs #18869
  • src/hg/htdocs/inc/dataApi.html - lines changed 42, context: html, text, full: html, text

0e2add24701b51d27afce7581ad3c54789f6d23e Fri Mar 22 15:35:14 2019 -0700

• help text now in include file refs #18869
  • src/hg/hubApi/hubApi.c - lines changed 54, context: html, text, full: html, text

61f2aaabcc3065c5a9378fbe2fae8c6359d5de5e Mon Mar 25 10:09:54 2019 -0700

• v380 preview1, refs #23070
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text