Commits for braney

v383_preview to v383_preview2 (2019-05-27 to 2019-06-03) v383

280129bd4633e10b368b89f4d1fcd62b879f6e99 Mon May 27 13:33:46 2019 -0700

• reintroduce the panaply of hg19 ENCODE tracks to the world.
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 3, context: html, text, full: html, text

616f4b3c9fb1e234c4998202afd9718a7b00699c Wed May 29 10:24:59 2019 -0700

• put out a warning instead of crashing if the number of subtracks in a subGroup is zero. #23364
  • src/hg/lib/hui.c - lines changed 5, context: html, text, full: html, text

76b7f51a5be7d26bc0638b123ad4fd3d61d8406c Wed May 29 10:54:02 2019 -0700

• postscript output was missing the ability to outline circles. Now it works!
  • src/inc/psGfx.h - lines changed 1, context: html, text, full: html, text
  • src/lib/psGfx.c - lines changed 4, context: html, text, full: html, text
  • src/lib/pscmGfx.c - lines changed 1, context: html, text, full: html, text

cb63a575751c4a60e48340bd320934cccb053f75 Wed May 29 13:14:08 2019 -0700

• some tweaks to the lm allocater to allow it to use a memory block passed into rather than allocating its own memory. Also a checkpoint routine for the memory allocators that allows a caller to find out how much memory has been allocated since the last time it was called.
  • src/inc/common.h - lines changed 3, context: html, text, full: html, text
  • src/inc/localmem.h - lines changed 6, context: html, text, full: html, text
  • src/lib/localmem.c - lines changed 34, context: html, text, full: html, text
  • src/lib/memalloc.c - lines changed 18, context: html, text, full: html, text

fa7a11afb5f19dd5a2fa3382fc38662f34b6f147 Wed May 29 13:55:44 2019 -0700

• first cut at caching trackDb in a shared memory location. No changes in running code if "cacheTrackDb" hg.conf variable doesn't exist
  • src/hg/inc/trackDb.h - lines changed 15, context: html, text, full: html, text
  • src/hg/lib/hdb.c - lines changed 46, context: html, text, full: html, text
  • src/hg/lib/trackDbCustom.c - lines changed 130, context: html, text, full: html, text

ac0d694dd1b7a53bd182b9555048eaa3fb0bf512 Sun Jun 2 14:31:20 2019 -0700

• sort myHub list alphabetically by shortLabel
  • src/hg/hgHubConnect/hgHubConnect.c - lines changed 13, context: html, text, full: html, text