File Changes for kent
switch to commits view, user indexv386_base to v387_preview (2019-08-12 to 2019-08-19) v387
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- src/hca/fromGeo/geoToHcaStorm/geoToHcaStorm.c
- lines changed 51, context: html, text, full: html, text
297d058645dec268bcb1eed73aac24fde40b5653 Sun Aug 11 10:33:09 2019 -0700
Figuring out pairing from SRA table rather than command line.
- src/hca/fromGeo/geoToTagStorm/geoToTagStorm.c
- lines changed 27, context: html, text, full: html, text
bb24f5d21ab5222545271030c5b228dd8b933e76 Sun Aug 11 10:32:36 2019 -0700
Dealing with table_start and table_end tags and # lines in soft files.
- lines changed 1, context: html, text, full: html, text
f01e71b655e06f757ef80e5f856597c138d5f27e Mon Aug 12 21:44:00 2019 -0700
Underbarring out some more strange characters that appear in characteristics.
- lines changed 21, context: html, text, full: html, text
753ae4aa7ce0601012111f6915676f94f91b6870 Wed Aug 14 19:10:07 2019 -0700
Being more thorough about stripping nonprintable characters from symbols.
- src/hg/oneShot/freen/freen.c
- lines changed 37, context: html, text, full: html, text
48999c1bed145bf5fb337ce5b570161c71007ac3 Sun Aug 11 10:31:37 2019 -0700
Freen tests replaceChars()
- src/inc/strex.h
- lines changed 16, context: html, text, full: html, text
af48dccaec7297a6031a6f12cafc4b4df438ffa5 Wed Aug 14 19:08:18 2019 -0700
Passing symbol table to parse for better error checking.
- src/lib/strex.c
- lines changed 38, context: html, text, full: html, text
b34dfdc4c7db63cd27ff9843ff4f4ac617905059 Fri Aug 9 17:45:48 2019 -0700
Adding uncsv and untsv builtin functions. Making [] operator just select zero based character within a string.
- lines changed 118, context: html, text, full: html, text
a220449e97fcf9dd90acd89f7af51e694829d662 Fri Aug 9 23:10:47 2019 -0700
Making array ranges and negative indexes work as they do in python.
- lines changed 13, context: html, text, full: html, text
99c8ed08eb3655325a40db805e9ba44db0302bd6 Fri Aug 9 23:39:05 2019 -0700
Fixed off-by-one problem on empty end ranges.
- lines changed 20, context: html, text, full: html, text
22c5248388280556ba7c846adea6af4e9ae2aa50 Sun Aug 11 10:22:02 2019 -0700
Adding replace function.
- lines changed 1, context: html, text, full: html, text
7714cf4d6ed357c525a34f3b6e6048ddc90583c8 Sun Aug 11 11:57:03 2019 -0700
Making uncvs return empty when endex out of range like untsv does.
- lines changed 1, context: html, text, full: html, text
451ea8f912a071168211a36fc9533776c7e45ff2 Sun Aug 11 18:50:57 2019 -0700
Fixing a crash-on-null
- lines changed 31, context: html, text, full: html, text
0019ae3b59457f94944a36cfa4bdebc72b017dba Sun Aug 11 20:36:23 2019 -0700
Adding new strip function. Making replace handle empty oldval in a useful way, as a way for setting defaults when a value is empty.
- lines changed 30, context: html, text, full: html, text
835a903827681f7295594708dccaec0cbf2e20fa Mon Aug 12 21:37:48 2019 -0700
Adding new built-in function fix() for doing constant/constant substitutions. Allowing negative indexes in split() and separate() that work like negative array indexes do.
- lines changed 78, context: html, text, full: html, text
2acdc761f35359fc271e30c6d823357b03155ceb Tue Aug 13 11:16:01 2019 -0700
Adding or operation.
- lines changed 87, context: html, text, full: html, text
a76c6133077702d8bddf356ed39c20d697db0294 Tue Aug 13 11:51:58 2019 -0700
Adding and logical operation. Making type coercion for it and logical or follow a different and simpler path than for the math ops.
- lines changed 167, context: html, text, full: html, text
8577c06e473e9a888f83df214675ea3b1a4ede30 Tue Aug 13 18:51:01 2019 -0700
Implementing pick() operation, more or less the strex equivalent to switch.
- lines changed 85, context: html, text, full: html, text
a055c0563f27e4f5b4cc10aef680a41b89ef3992 Wed Aug 14 19:07:18 2019 -0700
Adding upper, lower, and symbol built in functions. Making it so that you can pass a symbol table to parser for error checking.
- lines changed 96, context: html, text, full: html, text
4d9a3cd9ed4c6f8dff6aaa45c751ba5e6c56440f Wed Aug 14 22:36:21 2019 -0700
Adding the ternary conditional operator, as well as built in boolean functions in() same() starts() and ends()
- lines changed 11, context: html, text, full: html, text
f56f480add42cd89cb03aa1fc6ff503a1c5e4203 Thu Aug 15 09:01:34 2019 -0700
Made now return time in the ISO 1806 format variant the expresses it in local time with an offset to GMT. Moved around some sections in the doc file.
- src/lib/strex.doc
- lines changed 5, context: html, text, full: html, text
b6872d22529e9c2974147cdc0837b12810524b4e Fri Aug 9 17:49:30 2019 -0700
Adding info on csv/array switcharoo
- lines changed 19, context: html, text, full: html, text
3bdf5c9a6b67003430bb61a0fbedc3af58bf0080 Sat Aug 10 19:52:00 2019 -0700
Describing array ranges.
- lines changed 7, context: html, text, full: html, text
77dd570facf3d0f5c26bceafc8bd22dc0e020805 Sun Aug 11 10:35:19 2019 -0700
Adding replace function. Being explicit about empty string returns from split and separate.
- lines changed 10, context: html, text, full: html, text
d461c744cf05e04954aaa161ccff8d908246d2b3 Sun Aug 11 18:50:31 2019 -0700
Improving array range examples
- lines changed 29, context: html, text, full: html, text
835a903827681f7295594708dccaec0cbf2e20fa Mon Aug 12 21:37:48 2019 -0700
Adding new built-in function fix() for doing constant/constant substitutions. Allowing negative indexes in split() and separate() that work like negative array indexes do.
- lines changed 25, context: html, text, full: html, text
b740c58bf3476bf6bba92359dae0a8f0c85efbe4 Tue Aug 13 11:53:16 2019 -0700
Adding doc on 'and' and 'or' operations. Adding details of what happens when you add mixed string to numbers.
- lines changed 7, context: html, text, full: html, text
8577c06e473e9a888f83df214675ea3b1a4ede30 Tue Aug 13 18:51:01 2019 -0700
Implementing pick() operation, more or less the strex equivalent to switch.
- lines changed 10, context: html, text, full: html, text
4a3c4b8969e55de992c22ca6e2ec1ba807910bc6 Wed Aug 14 19:06:15 2019 -0700
Adding info about symbol function. Improving docs on 'or'
- lines changed 20, context: html, text, full: html, text
e53a538138cc2e88a4c823a1442aef461cc0824b Wed Aug 14 22:37:11 2019 -0700
Adding the ternary conditional operator, as well as built in boolean functions in() same() starts() and ends()
- lines changed 47, context: html, text, full: html, text
f56f480add42cd89cb03aa1fc6ff503a1c5e4203 Thu Aug 15 09:01:34 2019 -0700
Made now return time in the ISO 1806 format variant the expresses it in local time with an offset to GMT. Moved around some sections in the doc file.
- src/tabFile/tabToTabDir/tabToTabDir.c
- lines changed 18, context: html, text, full: html, text
3383c94388349981d5e84f542918e420502326cc Sun Aug 11 10:25:04 2019 -0700
Improving error message for when key is not unique. This was a fair bit of work for a good error message, but it comes up often in the most difficult part of wrangling, coming up with a good unique id for a subtable.
- lines changed 2, context: html, text, full: html, text
a6bac4d769e3e94ba329ff893c9e404d96c9a166 Sun Aug 11 12:15:07 2019 -0700
Putting off making output directory until input is parsed ok.A
- lines changed 8, context: html, text, full: html, text
a3c905cd9655de851ad5288797aacade677b1a57 Mon Aug 12 21:42:35 2019 -0700
Updating non-unique key error message to be much more informative. Making it so that if index value is empty the row is skipped for the table being indexed. Fixing off-by-one bug in line number for error reporting. Updated usage statement a little.
- lines changed 13, context: html, text, full: html, text
9dcd0edee0049d4cf6aca9e5cce5c4a521cce1d2 Wed Aug 14 19:09:10 2019 -0700
Passing symbol table to parse for better error checking.
- lines changed 1, context: html, text, full: html, text
10e483e6db7309cda41f3e1fcf29d38cf43006c8 Thu Aug 15 09:02:31 2019 -0700
Improving key don't work error message a hair.
- src/tabFile/tabToTabDir/tests/doTest.csh
- lines changed 5, context: html, text, full: html, text
d85e73c10264f168a856e4fbebca929fb9cf4f0c Sun Aug 11 10:30:41 2019 -0700
Updating test set with replace function.
- lines changed 1, context: html, text, full: html, text
e8aaa565436765bfa0b90ec7133ccb2418bf20d1 Mon Aug 12 21:48:37 2019 -0700
Adapting to where I think Max must have moved things.
- src/tabFile/tabToTabDir/tests/expected/a_strex_test.tsv
- lines changed 2, context: html, text, full: html, text
b34dfdc4c7db63cd27ff9843ff4f4ac617905059 Fri Aug 9 17:45:48 2019 -0700
Adding uncsv and untsv builtin functions. Making [] operator just select zero based character within a string.
- lines changed 2, context: html, text, full: html, text
77055487e5e5915ccd800234fa11cc5740cc477b Fri Aug 9 23:12:32 2019 -0700
Updating test set for new array range features.
- lines changed 1, context: html, text, full: html, text
6d7aa7112262c764bb3b835bfa818eae56043cc2 Fri Aug 9 23:41:45 2019 -0700
Adding more to test set
- lines changed 2, context: html, text, full: html, text
d85e73c10264f168a856e4fbebca929fb9cf4f0c Sun Aug 11 10:30:41 2019 -0700
Updating test set with replace function.
- lines changed 2, context: html, text, full: html, text
d760c596d6e3aaaca27bde072d6a8ea8d7da33c0 Sun Aug 11 20:38:04 2019 -0700
Adding strip and new test case for replace to test set.
- lines changed 2, context: html, text, full: html, text
e280722ea239dcb2dca5e2139466aed87210350e Mon Aug 12 21:36:05 2019 -0700
Adding new test cases for negative indexes in split and separate.
- lines changed 2, context: html, text, full: html, text
062f26e6f150318bc712ff922b0f810f23932387 Wed Aug 14 18:55:59 2019 -0700
Updating test set with new strex functions.
- lines changed 2, context: html, text, full: html, text
ad304ec616d326746e2e9bd6e56a5f76e9c5375d Wed Aug 14 22:54:37 2019 -0700
Updating test set with something for conditional operator.
- src/tabFile/tabToTabDir/tests/input/spec.txt
- lines changed 5, context: html, text, full: html, text
062f26e6f150318bc712ff922b0f810f23932387 Wed Aug 14 18:55:59 2019 -0700
Updating test set with new strex functions.
- lines changed 5, context: html, text, full: html, text
ad304ec616d326746e2e9bd6e56a5f76e9c5375d Wed Aug 14 22:54:37 2019 -0700
Updating test set with something for conditional operator.
- src/tabFile/tabToTabDir/tests/spec.txt
- lines changed 3, context: html, text, full: html, text
7baeeecd2f814ca66ab0e135f8c1cbfebfcf8763 Fri Aug 9 17:25:51 2019 -0700
Converting array operations into csv operations in preparation for making arrays operate like python string arrays more or less.
- lines changed 3, context: html, text, full: html, text
b34dfdc4c7db63cd27ff9843ff4f4ac617905059 Fri Aug 9 17:45:48 2019 -0700
Adding uncsv and untsv builtin functions. Making [] operator just select zero based character within a string.
- lines changed 14, context: html, text, full: html, text
77055487e5e5915ccd800234fa11cc5740cc477b Fri Aug 9 23:12:32 2019 -0700
Updating test set for new array range features.
- lines changed 3, context: html, text, full: html, text
d85e73c10264f168a856e4fbebca929fb9cf4f0c Sun Aug 11 10:30:41 2019 -0700
Updating test set with replace function.
- lines changed 3, context: html, text, full: html, text
d760c596d6e3aaaca27bde072d6a8ea8d7da33c0 Sun Aug 11 20:38:04 2019 -0700
Adding strip and new test case for replace to test set.
- lines changed 4, context: html, text, full: html, text
e280722ea239dcb2dca5e2139466aed87210350e Mon Aug 12 21:36:05 2019 -0700
Adding new test cases for negative indexes in split and separate.
- src/utils/makefile
- lines changed 1, context: html, text, full: html, text
2a446ed0d69d2a846c4f990c6e577d2788c1b88e Tue Aug 13 11:54:35 2019 -0700
Making a little string calculator mostly just to test strex library module.
- src/utils/strexCalc/makefile
- lines changed 3, context: html, text, full: html, text
2a446ed0d69d2a846c4f990c6e577d2788c1b88e Tue Aug 13 11:54:35 2019 -0700
Making a little string calculator mostly just to test strex library module.
- src/utils/strexCalc/strexCalc.c
- lines changed 45, context: html, text, full: html, text
2a446ed0d69d2a846c4f990c6e577d2788c1b88e Tue Aug 13 11:54:35 2019 -0700
Making a little string calculator mostly just to test strex library module.
- lines changed 2, context: html, text, full: html, text
1a846937b75cc1852ffbaa1bb5d755286796b43c Wed Aug 14 19:07:43 2019 -0700
Passing symbol table to parse for better error checking.
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